Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052837

Identifier: 89052837

GI number: 89052837

Start: 350894

End: 351484

Strand: Direct

Name: 89052837

Synonym: Jann_0346

Alternate gene names: NA

Gene position: 350894-351484 (Clockwise)

Preceding gene: 89052836

Following gene: 89052840

Centisome position: 8.13

GC content: 58.54

Gene sequence:

>591_bases
ATGAACCGCTTTCTTCTGCCATTGCTTGCGATGGCATTCGCTTCCCCTGTGGCAGCGCAAAGTAGCCTTCCGAGTTCGGA
GGGCGGTTGGGCCGGAGGCCATCTTGGCATTCAGCTTGGTATGCCAATCAGCAGTTCCCTCACCTTTGACAGCGCACCTG
GCATTGAGTCGGAGTTGGATGGCATGTCTGGTGGCGTTCAGATCGGATTTCGACGCCAGACGAACGCCTTCGTTTATGGC
GGCGAGGCTGCGTTTCTGGTGTCAGAGCCGGTGATTGAACAAATGGGCGCGCCCGATGTGGATGTCCGGGTGACGACCAC
GCGTCTCGGCGCTCAGGCGGGGTATGATCTGGGCCGCTTCCTGCCCTATGGCACCCTTGGCGTCGCGCGGATGACGTTCC
AAGACACTGTCGGGTTCGGCGATACGTCGTCTTTCGGGACGTTTGCGGGGCTTGGCGTCGAATATCAGTTGGGGGAATCG
ACATCTGTCGGACTGCAGGCCGTCCGCGAGAATTTCGAGAACTTCAATGAGGGCGCGGATATCAACGTGACCCAGACGAA
CGTGAGCGTTCAGTTCAACATTCGCTACTGA

Upstream 100 bases:

>100_bases
CATCGGCCTGCGCGTCTACTTTTCCCACGCCTTTCATGATGATCTTGCTATACTGCCGTCAGGACGTAGAGGCACGTCGA
GCACATAATGGAGTTCATCA

Downstream 100 bases:

>100_bases
ACCCTGCCCGTCATCAGATGAACCCGGCGCACCCCTGATCAGGTGCGCCGGTCGTTCTCTATCGCCCCGGGATCTCGCCG
CGTTTGCCCGAAAGGGTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MNRFLLPLLAMAFASPVAAQSSLPSSEGGWAGGHLGIQLGMPISSSLTFDSAPGIESELDGMSGGVQIGFRRQTNAFVYG
GEAAFLVSEPVIEQMGAPDVDVRVTTTRLGAQAGYDLGRFLPYGTLGVARMTFQDTVGFGDTSSFGTFAGLGVEYQLGES
TSVGLQAVRENFENFNEGADINVTQTNVSVQFNIRY

Sequences:

>Translated_196_residues
MNRFLLPLLAMAFASPVAAQSSLPSSEGGWAGGHLGIQLGMPISSSLTFDSAPGIESELDGMSGGVQIGFRRQTNAFVYG
GEAAFLVSEPVIEQMGAPDVDVRVTTTRLGAQAGYDLGRFLPYGTLGVARMTFQDTVGFGDTSSFGTFAGLGVEYQLGES
TSVGLQAVRENFENFNEGADINVTQTNVSVQFNIRY
>Mature_196_residues
MNRFLLPLLAMAFASPVAAQSSLPSSEGGWAGGHLGIQLGMPISSSLTFDSAPGIESELDGMSGGVQIGFRRQTNAFVYG
GEAAFLVSEPVIEQMGAPDVDVRVTTTRLGAQAGYDLGRFLPYGTLGVARMTFQDTVGFGDTSSFGTFAGLGVEYQLGES
TSVGLQAVRENFENFNEGADINVTQTNVSVQFNIRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20696; Mature: 20696

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFLLPLLAMAFASPVAAQSSLPSSEGGWAGGHLGIQLGMPISSSLTFDSAPGIESELD
CCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHCC
GMSGGVQIGFRRQTNAFVYGGEAAFLVSEPVIEQMGAPDVDVRVTTTRLGAQAGYDLGRF
CCCCCEEEEEEECCCEEEECCCEEEEECCHHHHHCCCCCCEEEEEEEECCCCCCCCHHHH
LPYGTLGVARMTFQDTVGFGDTSSFGTFAGLGVEYQLGESTSVGLQAVRENFENFNEGAD
CCCCCCCEEEEEEHHCCCCCCCCCCCCEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCC
INVTQTNVSVQFNIRY
EEEEEEEEEEEEEEEC
>Mature Secondary Structure
MNRFLLPLLAMAFASPVAAQSSLPSSEGGWAGGHLGIQLGMPISSSLTFDSAPGIESELD
CCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHCC
GMSGGVQIGFRRQTNAFVYGGEAAFLVSEPVIEQMGAPDVDVRVTTTRLGAQAGYDLGRF
CCCCCEEEEEEECCCEEEECCCEEEEECCHHHHHCCCCCCEEEEEEEECCCCCCCCHHHH
LPYGTLGVARMTFQDTVGFGDTSSFGTFAGLGVEYQLGESTSVGLQAVRENFENFNEGAD
CCCCCCCEEEEEEHHCCCCCCCCCCCCEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCC
INVTQTNVSVQFNIRY
EEEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA