Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052794

Identifier: 89052794

GI number: 89052794

Start: 309907

End: 310644

Strand: Direct

Name: 89052794

Synonym: Jann_0303

Alternate gene names: NA

Gene position: 309907-310644 (Clockwise)

Preceding gene: 89052790

Following gene: 89052795

Centisome position: 7.18

GC content: 63.69

Gene sequence:

>738_bases
ATGATGTCAGACAAACCCTCCGATACGGATGATGGCTTGGCCTCAACAAGCCTGAGCGTCGCCGTCCAGTTCGTTGGGGC
GGGCTGTGTGGGCGCCGCTGCCGTTGCGACGTTGGCCTGGGCGCTGGTTGGCAATGCGCTTGCCATTGGCATTGCGGTAA
TTTTCTTCGCGGCTGTCATGGCGATCGCGCTTGTCGGTCTCGTGGCCAGTTTTCCGCATCGGGTCATCGGCTTGTGTAAT
CTGGCCACAATCGCAAGGTTGGCACTGGTGTCCGTCTTGATTGCGGCACTGGTGGCGCCCGCCGCATCTGCATGGGCCGT
GTTTGGGCTGGCGGTTCTGGCCTTCGCGTTGGATGGGCTGGACGGGTATCTGGCCCGGAGAGAGGGGCGCGCCTCCGCAT
TTGGCGCGCGCTTCGACATGGAGGTTGATTCCCTTCTGGCCCTCACATTGGCCCTGCTGACCTGGCAAAGTGGCGCGGTT
GGGGCCTATGTCCTGATCCTAGGCCTGCCGCGTTATGCGTTCTGGGTCGCTCAGGTTCCATTCCCGTGGCTGGGCCACGA
CCTGCCCGAGCGCTTCAGCCGCAAGGTTGCTTGCGTTGTGCAGATCGCCGCGCTGATCCTGGCGCTGTTCCCGCCGGCGC
CGTCGATCTTGGTGGGCAGCATCGCGGGGCTGGCCGCAATCGCGCTGGTCTGGTCATTCTCACTGGATGCTCGAACCCTC
TGGAGGGCGCAGACGTGA

Upstream 100 bases:

>100_bases
CCTCGCTATCGGTTAACGGTTGCCATCCCCGGCTATCAGGCCACTTTGGGTGCAATCCCCTCGCTTAGACAAGGTCAGAA
TTGGCAAGGCCCTCCTCACG

Downstream 100 bases:

>100_bases
GACTCCTTCGGCTCGCGATTGCGGCGCTGATCCTGTTCCTGGTGCTCATCCAACCGAACCATCCCGCCGCCCTCGCGTGG
GGCGCGCTTGGTGTTTTTCC

Product: CDP-alcohol phosphatidyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MMSDKPSDTDDGLASTSLSVAVQFVGAGCVGAAAVATLAWALVGNALAIGIAVIFFAAVMAIALVGLVASFPHRVIGLCN
LATIARLALVSVLIAALVAPAASAWAVFGLAVLAFALDGLDGYLARREGRASAFGARFDMEVDSLLALTLALLTWQSGAV
GAYVLILGLPRYAFWVAQVPFPWLGHDLPERFSRKVACVVQIAALILALFPPAPSILVGSIAGLAAIALVWSFSLDARTL
WRAQT

Sequences:

>Translated_245_residues
MMSDKPSDTDDGLASTSLSVAVQFVGAGCVGAAAVATLAWALVGNALAIGIAVIFFAAVMAIALVGLVASFPHRVIGLCN
LATIARLALVSVLIAALVAPAASAWAVFGLAVLAFALDGLDGYLARREGRASAFGARFDMEVDSLLALTLALLTWQSGAV
GAYVLILGLPRYAFWVAQVPFPWLGHDLPERFSRKVACVVQIAALILALFPPAPSILVGSIAGLAAIALVWSFSLDARTL
WRAQT
>Mature_245_residues
MMSDKPSDTDDGLASTSLSVAVQFVGAGCVGAAAVATLAWALVGNALAIGIAVIFFAAVMAIALVGLVASFPHRVIGLCN
LATIARLALVSVLIAALVAPAASAWAVFGLAVLAFALDGLDGYLARREGRASAFGARFDMEVDSLLALTLALLTWQSGAV
GAYVLILGLPRYAFWVAQVPFPWLGHDLPERFSRKVACVVQIAALILALFPPAPSILVGSIAGLAAIALVWSFSLDARTL
WRAQT

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25332; Mature: 25332

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSDKPSDTDDGLASTSLSVAVQFVGAGCVGAAAVATLAWALVGNALAIGIAVIFFAAVM
CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIALVGLVASFPHRVIGLCNLATIARLALVSVLIAALVAPAASAWAVFGLAVLAFALDGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCH
DGYLARREGRASAFGARFDMEVDSLLALTLALLTWQSGAVGAYVLILGLPRYAFWVAQVP
HHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCCC
FPWLGHDLPERFSRKVACVVQIAALILALFPPAPSILVGSIAGLAAIALVWSFSLDARTL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
WRAQT
HCCCC
>Mature Secondary Structure
MMSDKPSDTDDGLASTSLSVAVQFVGAGCVGAAAVATLAWALVGNALAIGIAVIFFAAVM
CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIALVGLVASFPHRVIGLCNLATIARLALVSVLIAALVAPAASAWAVFGLAVLAFALDGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCH
DGYLARREGRASAFGARFDMEVDSLLALTLALLTWQSGAVGAYVLILGLPRYAFWVAQVP
HHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCCC
FPWLGHDLPERFSRKVACVVQIAALILALFPPAPSILVGSIAGLAAIALVWSFSLDARTL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
WRAQT
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA