| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is cysQ [H]
Identifier: 89052706
GI number: 89052706
Start: 210040
End: 210837
Strand: Direct
Name: cysQ [H]
Synonym: Jann_0215
Alternate gene names: 89052706
Gene position: 210040-210837 (Clockwise)
Preceding gene: 89052704
Following gene: 89052707
Centisome position: 4.86
GC content: 60.53
Gene sequence:
>798_bases ATGGATCACGAGAAAATTGTTGCCGTCATGCGTACCGCTGCCCTGGAGGCCGGCGACGCGATCATGGAGGTTTATGGCGC GGAGGATTTCGACGTGAAGGTGAAATCCGACGATAGCCCTGTGACAGAGGCGGATGAGGCGGCGGATGCCATCATTTCCC GGCACCTGCGCGCGGCGTTTCCGGACGTGACGTTGATCACCGAAGAACAGGCCGACAGCCATGGGCTGAGCGCGGATCAG TTCCTGATCGTGGACCCGTTGGACGGCACCAAAGAGTTCATCAAGCGGCGCGGCGATTTCACGGTGAACATCGCCTTGGT GGAACATGGCGTACCTGTGCGTGGCATCGTTTATGCGCCCGCGAAGGGGCGTCTGTTTTACACAAATGCCGACGGAGTGA GCATTGAGGAGGCAGGCCCGTTCGAGCCGAATGCGCCTGGCAGGCTCGATCCAATCACAGTGTCACGCCCGGATAACAGC GCGTTGCGCGTCGTGGCGTCGAAGTCGCACCGGGATCAGGCAACAGACCACTACATCAACAAATACGACCACGCGGATAT GAAAAGCGCAGGGTCATCGCTGAAGTTCTGCCTTGTCGCGACGGGGGAGGCGGATTTGTACCCCCGCCTTGGCCGCACGA TGGAATGGGATACCGCGGCAGGCGATGCCGTGTTGCGCGGGGCCGGTGGCAAGATGGTCCGGTTTGAGGATCATGCGCCG TTTGAATACGGCAAGGACGGGTTCGCCAACGGCTTCTTCATTGCCTACGCCCCGGGTCTGGAATTGCAGCTGCCGTGA
Upstream 100 bases:
>100_bases GCTTGTTTTGCGCGCCGCCCGCAGGCCTTGCTTGCAGTTCTCACGTGGACCGAGGATAACGCGGTAAGTGTTAATTTTCA ATTCAACCGTGGGTGAGCCT
Downstream 100 bases:
>100_bases GCGTTGCTTGCGTCATCCCGGCCCGCTATGCGTCTGCCCGCTTTCCCGGCAAACCGCTTGCTATGCTGACGGGCGCAACC GGTGAGAAAGTGTCCCTGAT
Product: 3'(2'),5'-bisphosphate nucleotidase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MDHEKIVAVMRTAALEAGDAIMEVYGAEDFDVKVKSDDSPVTEADEAADAIISRHLRAAFPDVTLITEEQADSHGLSADQ FLIVDPLDGTKEFIKRRGDFTVNIALVEHGVPVRGIVYAPAKGRLFYTNADGVSIEEAGPFEPNAPGRLDPITVSRPDNS ALRVVASKSHRDQATDHYINKYDHADMKSAGSSLKFCLVATGEADLYPRLGRTMEWDTAAGDAVLRGAGGKMVRFEDHAP FEYGKDGFANGFFIAYAPGLELQLP
Sequences:
>Translated_265_residues MDHEKIVAVMRTAALEAGDAIMEVYGAEDFDVKVKSDDSPVTEADEAADAIISRHLRAAFPDVTLITEEQADSHGLSADQ FLIVDPLDGTKEFIKRRGDFTVNIALVEHGVPVRGIVYAPAKGRLFYTNADGVSIEEAGPFEPNAPGRLDPITVSRPDNS ALRVVASKSHRDQATDHYINKYDHADMKSAGSSLKFCLVATGEADLYPRLGRTMEWDTAAGDAVLRGAGGKMVRFEDHAP FEYGKDGFANGFFIAYAPGLELQLP >Mature_265_residues MDHEKIVAVMRTAALEAGDAIMEVYGAEDFDVKVKSDDSPVTEADEAADAIISRHLRAAFPDVTLITEEQADSHGLSADQ FLIVDPLDGTKEFIKRRGDFTVNIALVEHGVPVRGIVYAPAKGRLFYTNADGVSIEEAGPFEPNAPGRLDPITVSRPDNS ALRVVASKSHRDQATDHYINKYDHADMKSAGSSLKFCLVATGEADLYPRLGRTMEWDTAAGDAVLRGAGGKMVRFEDHAP FEYGKDGFANGFFIAYAPGLELQLP
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1790659, Length=210, Percent_Identity=47.1428571428571, Blast_Score=161, Evalue=4e-41, Organism=Escherichia coli, GI1788882, Length=231, Percent_Identity=32.9004329004329, Blast_Score=87, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71995897, Length=169, Percent_Identity=31.9526627218935, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71995905, Length=169, Percent_Identity=31.9526627218935, Blast_Score=68, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6320493, Length=202, Percent_Identity=29.7029702970297, Blast_Score=76, Evalue=5e-15, Organism=Drosophila melanogaster, GI21357957, Length=241, Percent_Identity=26.5560165975104, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24641722, Length=233, Percent_Identity=24.8927038626609, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24664922, Length=229, Percent_Identity=27.9475982532751, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 28743; Mature: 28743
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHEKIVAVMRTAALEAGDAIMEVYGAEDFDVKVKSDDSPVTEADEAADAIISRHLRAAF CCHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC PDVTLITEEQADSHGLSADQFLIVDPLDGTKEFIKRRGDFTVNIALVEHGVPVRGIVYAP CCEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCEEEEEEEEECCCCEEEEEECC AKGRLFYTNADGVSIEEAGPFEPNAPGRLDPITVSRPDNSALRVVASKSHRDQATDHYIN CCCEEEEECCCCCEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHH KYDHADMKSAGSSLKFCLVATGEADLYPRLGRTMEWDTAAGDAVLRGAGGKMVRFEDHAP HCCCCHHHHCCCCEEEEEEECCCCCCCHHHCCEEECCCCCCCEEEECCCCCEEEEECCCC FEYGKDGFANGFFIAYAPGLELQLP CCCCCCCCCCCEEEEEECCEEEECC >Mature Secondary Structure MDHEKIVAVMRTAALEAGDAIMEVYGAEDFDVKVKSDDSPVTEADEAADAIISRHLRAAF CCHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC PDVTLITEEQADSHGLSADQFLIVDPLDGTKEFIKRRGDFTVNIALVEHGVPVRGIVYAP CCEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCEEEEEEEEECCCCEEEEEECC AKGRLFYTNADGVSIEEAGPFEPNAPGRLDPITVSRPDNSALRVVASKSHRDQATDHYIN CCCEEEEECCCCCEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHH KYDHADMKSAGSSLKFCLVATGEADLYPRLGRTMEWDTAAGDAVLRGAGGKMVRFEDHAP HCCCCHHHHCCCCEEEEEEECCCCCCCHHHCCEEECCCCCCCEEEECCCCCEEEEECCCC FEYGKDGFANGFFIAYAPGLELQLP CCCCCCCCCCCEEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10993077 [H]