| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is mnmG
Identifier: 89052691
GI number: 89052691
Start: 191549
End: 193423
Strand: Direct
Name: mnmG
Synonym: Jann_0200
Alternate gene names: 89052691
Gene position: 191549-193423 (Clockwise)
Preceding gene: 89052690
Following gene: 89052692
Centisome position: 4.44
GC content: 53.07
Gene sequence:
>1875_bases GTGTTTCACGTGAAACATCGGCACTTTGATGTGATTGTGGTGGGCGGTGGACACGCTGGAGTGGAAGCGGCTGACGCAGC GTGTCGTGCAGGCGCACGCACGGCGTTGGTAACGTTGCGAAAAGACGACCTGGGTGTGATGTCCTGCAACCCCGCAATTG GTGGCCTGGGTAAGGGTCACTTGGTACGTGAGATTGATGCCATGGGTGGTGTCATGGGGTGCGCTGCTGATGCTTCGGGT ATTCAATATCGCTTGTTGAATCGGAAAAAAGGGGCCGCTGTTCAAGGACCGCGAACCCAATCTGACAGGGCGTTATACAA GTCAGCCATCCAGGATCACATGCGGAACGTCACTGAATTGACTGTGATTGAGGGCGAGGTTGCAGACGTAATCGTTGAGA GTGAAACAGTTTGCGGCGTTTCGTTTACAGATGGCCAGAGCATAAGCGCGAGATCTGTCGTTTTGACGACGGGCACCTTT TTACGTGGCGTGATCCATATTGGGCATGAGACGCGGTCTGGTGGCCGGTTTGGAGCAAATCGGGCCATCAAGCTAGCGGA GCGATTGTCCGCGATGAATTTGCCGGTCGGTCGGTTGAAAACCGGGACGCCACCCCGTCTTGCGGCGAAGTCAATCAATT GGGAGGCTTTGGACCACCAGCCATCAGACGACGATCCCACCTTTTTTTCGTTTCTAACAAAACGTGTGAGAGCCCGACAA ATTGCATGCGGCATTACGCATACAAACCCCCATACCCATGACATTATAGAACAAAACCTTGGTCGTTCGGCAATGTACGG GGGTAATATCGACAGCGTTGGGCCAAGATACTGCCCGTCGATTGAGGACAAGGTTGTTCGCTTCGCCGATAAGGTCTCGC ACCAGATATTCCTTGAACCGGAAGGTCTGACATCTGAAACCGTCTACCCGAACGGTATCTCAACCTCGCTGCCAATAGAC GTTCAACTTGATTATGTTCATTCCATCAAGGGTTTGGAGCACGCAGATATATTGCAGCCAGGATATGCAATCGAATATGA CTACATAGATCCAACCTGTTTGAACAACCGACTTGAACTTCAGGATCATCCCGGACTTTTTCTGGCCGGGCAGATCAACG GAACGACAGGGTACGAGGAAGCCGCCGCGCAGGGTTTGGTTGCGGGATTGAACGCCGCGTTCCATGCGCAGGATCGTGAT CCGCTGACATTTAGCAGACGCGAGTCGTATATCGGCGTTCTCGTTGATGACCTTGTAACGCGGGGTGTTTCGGAGCCCTA CAGGATGTTCACATCGCGTGCGGAGTACAGACTTTCGTTGAGGGCAGACAACGCAGACCAACGATTGACGCCCATCGCAG CGGATCTTGATTTGTTGACGGAAGAGAGAACTTCTGAATTTACCGCCAAAATGGAGCGGCTATCGCGCGGCTACGATATC CTGAATGATCTAGTGGTAACGTCCAAGCAAGCTGCCGCGGCGGGTATGAGCGTAAACGCGGACGGAAAAAAGCGGACTGG GGCTGAGCTACTAGCATTCCCATCGGTAGAACTTAGTGATATCGCGCAGCTCGAGCCCGCCGTTGGTCAGATCGATCCCG CAACGGCCAAACAGCTCAAGATAGAAGCAATCTACGCCGTCTATATCGAACGTCAAAACCAGGATGCATTCGCGTTGAAG CGAGATGAAGCAAAATCGATACCGGCGGACTTTCCGTATTCGTCTGTGGTTGGTCTATCGAACGAATTGCGGATGAAACT GATAAAGACGCGTCCATCCACGTTGGCGCAAGCCAGCCGTATCGACGGCATGACGCCGGCAGCTCTTGCACTTATCCTAA CGAAAATTCGACAGACCCAGCGCCTATCAGCATGA
Upstream 100 bases:
>100_bases TTCGTCACGCACAGCGATCGCTTGACTCCGTTATTGGTCGTGTGGATGTAGAGAATCTCTTGGGTGAAATTTTTTCCCGA TTTTGTATTGGGAAGTAGGA
Downstream 100 bases:
>100_bases ACGAAAGCGACGCAAAACACTGGCTCTCTGATCGTGTTTCACGTGAAACAATGGACCGGTTGGAACTCTATCACACGCTC CTTACCCGGTGGCAAAAGAC
Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 624; Mature: 624
Protein sequence:
>624_residues MFHVKHRHFDVIVVGGGHAGVEAADAACRAGARTALVTLRKDDLGVMSCNPAIGGLGKGHLVREIDAMGGVMGCAADASG IQYRLLNRKKGAAVQGPRTQSDRALYKSAIQDHMRNVTELTVIEGEVADVIVESETVCGVSFTDGQSISARSVVLTTGTF LRGVIHIGHETRSGGRFGANRAIKLAERLSAMNLPVGRLKTGTPPRLAAKSINWEALDHQPSDDDPTFFSFLTKRVRARQ IACGITHTNPHTHDIIEQNLGRSAMYGGNIDSVGPRYCPSIEDKVVRFADKVSHQIFLEPEGLTSETVYPNGISTSLPID VQLDYVHSIKGLEHADILQPGYAIEYDYIDPTCLNNRLELQDHPGLFLAGQINGTTGYEEAAAQGLVAGLNAAFHAQDRD PLTFSRRESYIGVLVDDLVTRGVSEPYRMFTSRAEYRLSLRADNADQRLTPIAADLDLLTEERTSEFTAKMERLSRGYDI LNDLVVTSKQAAAAGMSVNADGKKRTGAELLAFPSVELSDIAQLEPAVGQIDPATAKQLKIEAIYAVYIERQNQDAFALK RDEAKSIPADFPYSSVVGLSNELRMKLIKTRPSTLAQASRIDGMTPAALALILTKIRQTQRLSA
Sequences:
>Translated_624_residues MFHVKHRHFDVIVVGGGHAGVEAADAACRAGARTALVTLRKDDLGVMSCNPAIGGLGKGHLVREIDAMGGVMGCAADASG IQYRLLNRKKGAAVQGPRTQSDRALYKSAIQDHMRNVTELTVIEGEVADVIVESETVCGVSFTDGQSISARSVVLTTGTF LRGVIHIGHETRSGGRFGANRAIKLAERLSAMNLPVGRLKTGTPPRLAAKSINWEALDHQPSDDDPTFFSFLTKRVRARQ IACGITHTNPHTHDIIEQNLGRSAMYGGNIDSVGPRYCPSIEDKVVRFADKVSHQIFLEPEGLTSETVYPNGISTSLPID VQLDYVHSIKGLEHADILQPGYAIEYDYIDPTCLNNRLELQDHPGLFLAGQINGTTGYEEAAAQGLVAGLNAAFHAQDRD PLTFSRRESYIGVLVDDLVTRGVSEPYRMFTSRAEYRLSLRADNADQRLTPIAADLDLLTEERTSEFTAKMERLSRGYDI LNDLVVTSKQAAAAGMSVNADGKKRTGAELLAFPSVELSDIAQLEPAVGQIDPATAKQLKIEAIYAVYIERQNQDAFALK RDEAKSIPADFPYSSVVGLSNELRMKLIKTRPSTLAQASRIDGMTPAALALILTKIRQTQRLSA >Mature_624_residues MFHVKHRHFDVIVVGGGHAGVEAADAACRAGARTALVTLRKDDLGVMSCNPAIGGLGKGHLVREIDAMGGVMGCAADASG IQYRLLNRKKGAAVQGPRTQSDRALYKSAIQDHMRNVTELTVIEGEVADVIVESETVCGVSFTDGQSISARSVVLTTGTF LRGVIHIGHETRSGGRFGANRAIKLAERLSAMNLPVGRLKTGTPPRLAAKSINWEALDHQPSDDDPTFFSFLTKRVRARQ IACGITHTNPHTHDIIEQNLGRSAMYGGNIDSVGPRYCPSIEDKVVRFADKVSHQIFLEPEGLTSETVYPNGISTSLPID VQLDYVHSIKGLEHADILQPGYAIEYDYIDPTCLNNRLELQDHPGLFLAGQINGTTGYEEAAAQGLVAGLNAAFHAQDRD PLTFSRRESYIGVLVDDLVTRGVSEPYRMFTSRAEYRLSLRADNADQRLTPIAADLDLLTEERTSEFTAKMERLSRGYDI LNDLVVTSKQAAAAGMSVNADGKKRTGAELLAFPSVELSDIAQLEPAVGQIDPATAKQLKIEAIYAVYIERQNQDAFALK RDEAKSIPADFPYSSVVGLSNELRMKLIKTRPSTLAQASRIDGMTPAALALILTKIRQTQRLSA
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=635, Percent_Identity=45.6692913385827, Blast_Score=511, Evalue=1e-145, Organism=Homo sapiens, GI19882217, Length=660, Percent_Identity=43.9393939393939, Blast_Score=496, Evalue=1e-140, Organism=Homo sapiens, GI183227703, Length=675, Percent_Identity=42.962962962963, Blast_Score=491, Evalue=1e-139, Organism=Escherichia coli, GI2367273, Length=617, Percent_Identity=51.3776337115073, Blast_Score=595, Evalue=1e-171, Organism=Caenorhabditis elegans, GI17534255, Length=615, Percent_Identity=41.6260162601626, Blast_Score=464, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6321202, Length=617, Percent_Identity=43.7601296596434, Blast_Score=505, Evalue=1e-144, Organism=Drosophila melanogaster, GI24658174, Length=630, Percent_Identity=45.7142857142857, Blast_Score=509, Evalue=1e-144,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_JANSC (Q28VZ5)
Other databases:
- EMBL: CP000264 - RefSeq: YP_508142.1 - ProteinModelPortal: Q28VZ5 - SMR: Q28VZ5 - STRING: Q28VZ5 - GeneID: 3932637 - GenomeReviews: CP000264_GR - KEGG: jan:Jann_0200 - eggNOG: COG0445 - HOGENOM: HBG284774 - OMA: GIQFRVL - PhylomeDB: Q28VZ5 - ProtClustDB: PRK05192 - BioCyc: JSP290400:JANN_0200-MONOMER - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 67746; Mature: 67746
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHVKHRHFDVIVVGGGHAGVEAADAACRAGARTALVTLRKDDLGVMSCNPAIGGLGKGH CCCEEEEEEEEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCCCCCH LVREIDAMGGVMGCAADASGIQYRLLNRKKGAAVQGPRTQSDRALYKSAIQDHMRNVTEL HHHHHHHHCCHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE TVIEGEVADVIVESETVCGVSFTDGQSISARSVVLTTGTFLRGVIHIGHETRSGGRFGAN EEECCCHHEEEEECCEEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCH RAIKLAERLSAMNLPVGRLKTGTPPRLAAKSINWEALDHQPSDDDPTFFSFLTKRVRARQ HHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHH IACGITHTNPHTHDIIEQNLGRSAMYGGNIDSVGPRYCPSIEDKVVRFADKVSHQIFLEP HEEEEECCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECC EGLTSETVYPNGISTSLPIDVQLDYVHSIKGLEHADILQPGYAIEYDYIDPTCLNNRLEL CCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCCCHHHHCCCCCEEEECCCCHHHCCCEEEE QDHPGLFLAGQINGTTGYEEAAAQGLVAGLNAAFHAQDRDPLTFSRRESYIGVLVDDLVT CCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHEECCCCCCCEECCCHHHHHHHHHHHHH RGVSEPYRMFTSRAEYRLSLRADNADQRLTPIAADLDLLTEERTSEFTAKMERLSRGYDI CCCCHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNDLVVTSKQAAAAGMSVNADGKKRTGAELLAFPSVELSDIAQLEPAVGQIDPATAKQLK HHHHHHCCCHHHHCCCEECCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCHHHHEE IEAIYAVYIERQNQDAFALKRDEAKSIPADFPYSSVVGLSNELRMKLIKTRPSTLAQASR HEEEEEEEEEECCCCCEEEECCHHCCCCCCCCCHHHHCCCHHHHHHHHHCCCHHHHHHHH IDGMTPAALALILTKIRQTQRLSA CCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFHVKHRHFDVIVVGGGHAGVEAADAACRAGARTALVTLRKDDLGVMSCNPAIGGLGKGH CCCEEEEEEEEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCCCCCH LVREIDAMGGVMGCAADASGIQYRLLNRKKGAAVQGPRTQSDRALYKSAIQDHMRNVTEL HHHHHHHHCCHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE TVIEGEVADVIVESETVCGVSFTDGQSISARSVVLTTGTFLRGVIHIGHETRSGGRFGAN EEECCCHHEEEEECCEEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCH RAIKLAERLSAMNLPVGRLKTGTPPRLAAKSINWEALDHQPSDDDPTFFSFLTKRVRARQ HHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHH IACGITHTNPHTHDIIEQNLGRSAMYGGNIDSVGPRYCPSIEDKVVRFADKVSHQIFLEP HEEEEECCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECC EGLTSETVYPNGISTSLPIDVQLDYVHSIKGLEHADILQPGYAIEYDYIDPTCLNNRLEL CCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCCCHHHHCCCCCEEEECCCCHHHCCCEEEE QDHPGLFLAGQINGTTGYEEAAAQGLVAGLNAAFHAQDRDPLTFSRRESYIGVLVDDLVT CCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHEECCCCCCCEECCCHHHHHHHHHHHHH RGVSEPYRMFTSRAEYRLSLRADNADQRLTPIAADLDLLTEERTSEFTAKMERLSRGYDI CCCCHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNDLVVTSKQAAAAGMSVNADGKKRTGAELLAFPSVELSDIAQLEPAVGQIDPATAKQLK HHHHHHCCCHHHHCCCEECCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCHHHHEE IEAIYAVYIERQNQDAFALKRDEAKSIPADFPYSSVVGLSNELRMKLIKTRPSTLAQASR HEEEEEEEEEECCCCCEEEECCHHCCCCCCCCCHHHHCCCHHHHHHHHHCCCHHHHHHHH IDGMTPAALALILTKIRQTQRLSA CCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA