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The map label for this gene is ydaL [C]

Identifier: 89052680

GI number: 89052680

Start: 182236

End: 182847

Strand: Reverse

Name: ydaL [C]

Synonym: Jann_0189

Alternate gene names: 89052680

Gene position: 182847-182236 (Counterclockwise)

Preceding gene: 89052681

Following gene: 89052673

Centisome position: 4.23

GC content: 61.11

Gene sequence:

>612_bases
ATGGCGCGGCGTGGCAAACGGGGTCTGTCGGCGGACGACAAGGCGATTTGGGAGAAGGTTGCGGCGACGGCGACGCCCAT
GGATCGCTCTGGCGTACCCAAGATCACTGAAGAAACGCTGCCCAAGAAAACGCCCCCGCTCCGCCCGCAACCGTCGACAA
CCGCCGACAGGCTTCCCGCCTTTCGGGTGGGCGAAAAGTCGTCGTTCAACAAAGGAGCCGTCAACCACGCGCCGAGCCTG
TCGGTACAGCTTGCCCATGCCCCGGTCCGTATGGATCATGGCACGCACAAACGCATGACACGGGGCAAGCTGAAGCCGGA
AGGGCGCATTGACTTGCACGGTATGACCCTGTCTGAGGCGCACCCCGCGCTCATCAGTTTTATTTTCCATGCCCATGAAG
CGGAGAGGCGTTTGGTCTTGGTGATTACCGGCAAAGGAAAGGACCGCGATAGTGGCGGGCCGATCCCGATCCGGCGGGGA
ATCCTCAAACACCAGATTCCGAATTGGCTGACCTCGCCCCCGCTGGGTGCGATGATCCTGGATATACGGGAAGCGCATCA
ACGGCACGGTGGTGGCGGAGCTTATTACGTGTATCTCAAGCGCCGTCGCTAA

Upstream 100 bases:

>100_bases
CGATGCGGGCGAGGCTGCCGGCGTCATCCGGGATCCTGGCCGTATGATCGTGCTGCTTCCGATCGAGCGGGCGCACCAAC
TTATCCCGGACGCATGATCC

Downstream 100 bases:

>100_bases
CGGGCATGTTCGGGGTCAAGCAACACCAATGTCGCGTTCTGGATCGTCAGGATTGTGCCCGGCAATAGACCTGGCCGCGC
ATCTGGCCCATCTTCAAAGG

Product: Smr protein/MutS2

Products: NA

Alternate protein names: Smr Domain-Containing Protein; Smr Protein/MutS2 C-Terminal; DNA Repair Protein Smr/MutS Family; Smr Protein/MutS2 Domain Protein; Smr/MutS Family Protein; Smr Protein; Smr/MutS Family DNA Repair Protein; Smr Domain Family Protein; Smr Protein/MutS2-Like; Smr Family Protein; DNA Repair Protein; Smr Protein/Muts2-Like

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MARRGKRGLSADDKAIWEKVAATATPMDRSGVPKITEETLPKKTPPLRPQPSTTADRLPAFRVGEKSSFNKGAVNHAPSL
SVQLAHAPVRMDHGTHKRMTRGKLKPEGRIDLHGMTLSEAHPALISFIFHAHEAERRLVLVITGKGKDRDSGGPIPIRRG
ILKHQIPNWLTSPPLGAMILDIREAHQRHGGGGAYYVYLKRRR

Sequences:

>Translated_203_residues
MARRGKRGLSADDKAIWEKVAATATPMDRSGVPKITEETLPKKTPPLRPQPSTTADRLPAFRVGEKSSFNKGAVNHAPSL
SVQLAHAPVRMDHGTHKRMTRGKLKPEGRIDLHGMTLSEAHPALISFIFHAHEAERRLVLVITGKGKDRDSGGPIPIRRG
ILKHQIPNWLTSPPLGAMILDIREAHQRHGGGGAYYVYLKRRR
>Mature_202_residues
ARRGKRGLSADDKAIWEKVAATATPMDRSGVPKITEETLPKKTPPLRPQPSTTADRLPAFRVGEKSSFNKGAVNHAPSLS
VQLAHAPVRMDHGTHKRMTRGKLKPEGRIDLHGMTLSEAHPALISFIFHAHEAERRLVLVITGKGKDRDSGGPIPIRRGI
LKHQIPNWLTSPPLGAMILDIREAHQRHGGGGAYYVYLKRRR

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22450; Mature: 22319

Theoretical pI: Translated: 11.47; Mature: 11.47

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRGKRGLSADDKAIWEKVAATATPMDRSGVPKITEETLPKKTPPLRPQPSTTADRLPA
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHCCE
FRVGEKSSFNKGAVNHAPSLSVQLAHAPVRMDHGTHKRMTRGKLKPEGRIDLHGMTLSEA
EECCCCCCCCCCCCCCCCCCEEEEECCCEECCCCCHHHHHCCCCCCCCCEEEECCCHHHH
HPALISFIFHAHEAERRLVLVITGKGKDRDSGGPIPIRRGILKHQIPNWLTSPPLGAMIL
HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHH
DIREAHQRHGGGGAYYVYLKRRR
HHHHHHHHCCCCCEEEEEEEECC
>Mature Secondary Structure 
ARRGKRGLSADDKAIWEKVAATATPMDRSGVPKITEETLPKKTPPLRPQPSTTADRLPA
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHCCE
FRVGEKSSFNKGAVNHAPSLSVQLAHAPVRMDHGTHKRMTRGKLKPEGRIDLHGMTLSEA
EECCCCCCCCCCCCCCCCCCEEEEECCCEECCCCCHHHHHCCCCCCCCCEEEECCCHHHH
HPALISFIFHAHEAERRLVLVITGKGKDRDSGGPIPIRRGILKHQIPNWLTSPPLGAMIL
HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHH
DIREAHQRHGGGGAYYVYLKRRR
HHHHHHHHCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA