Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052647

Identifier: 89052647

GI number: 89052647

Start: 145261

End: 146697

Strand: Reverse

Name: 89052647

Synonym: Jann_0156

Alternate gene names: NA

Gene position: 146697-145261 (Counterclockwise)

Preceding gene: 89052648

Following gene: 89052646

Centisome position: 3.4

GC content: 63.33

Gene sequence:

>1437_bases
GTGAGCATGCTGAAACGCATATCCATTCGCTATCTGCCCTTCGCAGATGCCGCGTCCGAGGAGCTTCCTCTGGGCCAGTT
GTTGCGTCTGTCGCTGTTCCAGATCTCCGTCGGTATGGCCGCCGTTCTGCTGCTCGGCACGCTCAACCGCGTGATGATCG
TGGAGCTGCAAGTGCCCGCGTTCCTGGTTGCCTGCATGGTCGCGCTGCCCGTCCTGATCGCACCCTTCCGCGCGCTTCTG
GGCTTCAAGTCGGACACCTACAAATCCGCCATCGGCTGGAAACGCATTCCCTACCTTTGGTTCGGCACGCTCTGGCAATT
CGGTGGCCTCGCCATCATGCCCGCTTGCCTTCTGGTGCTTGGCGGAGAGGTCACGCAGGTCCGCTACGACATCCCCTATG
CCGGCGAGATCCTGGCCGCGCTGGCCTTCGTGATGACCGGCATCGGCATGCATATGACCCAGACCGCTGGCCTGGCCCTT
GCCGCGGATCGTGCGACAGATGAAACCCGCCCCCGCGTCGTCGCGCTTCTTTATGTGATGTTCCTTGTGGGCATGGGTGT
CAGCGCCGTCGTGATCGGCTGGTTCCTCTACGAGTTCACGCCGCTGGAGCTGATCCAGGTGATCCAATCCTGCGCCGTGC
TGACCCTGATCCTCAACGTCACCGCGCTTTGGAAGCAGGAGCGGATTGTGCCGACCACCAAGGCCCAACGCGCGGAGCCT
TCTCCGACCTTCAAAGAGGCATGGAGCGATTACGCGAGCGGCGGAACGGCGGGCCGGTTGCTCGCGGTCGTCTTCCTCGG
CACCATGGCGTTCAACATGCAGGACGTTCTGCTGGAGCCCTATGGCGGTGAAATCCTCGGCCTCTCCGTCTCTGCCACAA
CGCTTCTGACCGCCACATGGGCCGCCGGTGCGCTGGCGGGCTTCGCACTGGCTGCAAAATGGCTGTCCGGTGGCATCGAC
CCCATGCGCATGGGCGCGCGCGGCCTGTTGGCCGGCCTGGTCGCGTTTTGCGCCGTGATCTTCTCCAACCCGCTCGGCTC
ATCAGAGCTGTTCTTCGTGGGCGCTTTCATGATCGGATTTGGCGGCGGGCTCTTTGCCATCTCAACCCTCACGGCGGCCA
TGACCATGCCCACCAGCAACAAGGCGGGTCGCGGACTTGCCTTGGGGGCCTGGGGTGCGGCGCAGGCCACGGCAGCCGGT
CTGTCAATCGCTATCGGAGGCGCGGTCCACGACGGCGTCAATCATCTCGCCATGTCTGGACAACTTGGCGTTGCTTTGGG
GAATGAGGCGACGGGATATTCCGTCGTTTATCACCTCGAAATACTCCTGATCTTCGCGACGCTGGTGGCCCTTGGGCCGC
TGGTCCGCACACGACCACGGATGACCACCACCACGAATGGGGGGGCGAAAATCGGCCTCGCCGACCTCCCTACGTAA

Upstream 100 bases:

>100_bases
TATCTGAGAAATTACTTATAAATCAATGCGATAGAACCCTGCTCAAGCTTGAGCAAGTCACGTCCGGCTTCTACATCTCT
TCCTGTCTGGAGATGCGCGC

Downstream 100 bases:

>100_bases
AGGACTCTCAAGATGGAAAACGCATTCTTCGGGAACTTCGACCTCGCCAGTCTCTCGATCTGGCTGTTCTGGATCTTCTT
CGCGCTGCTGATCTACTACC

Product: PUCC protein

Products: NA

Alternate protein names: ORF477; Protein F1696 [H]

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MSMLKRISIRYLPFADAASEELPLGQLLRLSLFQISVGMAAVLLLGTLNRVMIVELQVPAFLVACMVALPVLIAPFRALL
GFKSDTYKSAIGWKRIPYLWFGTLWQFGGLAIMPACLLVLGGEVTQVRYDIPYAGEILAALAFVMTGIGMHMTQTAGLAL
AADRATDETRPRVVALLYVMFLVGMGVSAVVIGWFLYEFTPLELIQVIQSCAVLTLILNVTALWKQERIVPTTKAQRAEP
SPTFKEAWSDYASGGTAGRLLAVVFLGTMAFNMQDVLLEPYGGEILGLSVSATTLLTATWAAGALAGFALAAKWLSGGID
PMRMGARGLLAGLVAFCAVIFSNPLGSSELFFVGAFMIGFGGGLFAISTLTAAMTMPTSNKAGRGLALGAWGAAQATAAG
LSIAIGGAVHDGVNHLAMSGQLGVALGNEATGYSVVYHLEILLIFATLVALGPLVRTRPRMTTTTNGGAKIGLADLPT

Sequences:

>Translated_478_residues
MSMLKRISIRYLPFADAASEELPLGQLLRLSLFQISVGMAAVLLLGTLNRVMIVELQVPAFLVACMVALPVLIAPFRALL
GFKSDTYKSAIGWKRIPYLWFGTLWQFGGLAIMPACLLVLGGEVTQVRYDIPYAGEILAALAFVMTGIGMHMTQTAGLAL
AADRATDETRPRVVALLYVMFLVGMGVSAVVIGWFLYEFTPLELIQVIQSCAVLTLILNVTALWKQERIVPTTKAQRAEP
SPTFKEAWSDYASGGTAGRLLAVVFLGTMAFNMQDVLLEPYGGEILGLSVSATTLLTATWAAGALAGFALAAKWLSGGID
PMRMGARGLLAGLVAFCAVIFSNPLGSSELFFVGAFMIGFGGGLFAISTLTAAMTMPTSNKAGRGLALGAWGAAQATAAG
LSIAIGGAVHDGVNHLAMSGQLGVALGNEATGYSVVYHLEILLIFATLVALGPLVRTRPRMTTTTNGGAKIGLADLPT
>Mature_477_residues
SMLKRISIRYLPFADAASEELPLGQLLRLSLFQISVGMAAVLLLGTLNRVMIVELQVPAFLVACMVALPVLIAPFRALLG
FKSDTYKSAIGWKRIPYLWFGTLWQFGGLAIMPACLLVLGGEVTQVRYDIPYAGEILAALAFVMTGIGMHMTQTAGLALA
ADRATDETRPRVVALLYVMFLVGMGVSAVVIGWFLYEFTPLELIQVIQSCAVLTLILNVTALWKQERIVPTTKAQRAEPS
PTFKEAWSDYASGGTAGRLLAVVFLGTMAFNMQDVLLEPYGGEILGLSVSATTLLTATWAAGALAGFALAAKWLSGGIDP
MRMGARGLLAGLVAFCAVIFSNPLGSSELFFVGAFMIGFGGGLFAISTLTAAMTMPTSNKAGRGLALGAWGAAQATAAGL
SIAIGGAVHDGVNHLAMSGQLGVALGNEATGYSVVYHLEILLIFATLVALGPLVRTRPRMTTTTNGGAKIGLADLPT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pucC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR004896 [H]

Pfam domain/function: PF03209 PUCC [H]

EC number: NA

Molecular weight: Translated: 50317; Mature: 50186

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMLKRISIRYLPFADAASEELPLGQLLRLSLFQISVGMAAVLLLGTLNRVMIVELQVPA
CCCHHHCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHH
FLVACMVALPVLIAPFRALLGFKSDTYKSAIGWKRIPYLWFGTLWQFGGLAIMPACLLVL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
GGEVTQVRYDIPYAGEILAALAFVMTGIGMHMTQTAGLALAADRATDETRPRVVALLYVM
CCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCCCCCHHHHHHHHHH
FLVGMGVSAVVIGWFLYEFTPLELIQVIQSCAVLTLILNVTALWKQERIVPTTKAQRAEP
HHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SPTFKEAWSDYASGGTAGRLLAVVFLGTMAFNMQDVLLEPYGGEILGLSVSATTLLTATW
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEEHHHHHHHHHH
AAGALAGFALAAKWLSGGIDPMRMGARGLLAGLVAFCAVIFSNPLGSSELFFVGAFMIGF
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
GGGLFAISTLTAAMTMPTSNKAGRGLALGAWGAAQATAAGLSIAIGGAVHDGVNHLAMSG
CCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHCCCEEEECCHHHHHHHHHHCCC
QLGVALGNEATGYSVVYHLEILLIFATLVALGPLVRTRPRMTTTTNGGAKIGLADLPT
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEECCCCCCC
>Mature Secondary Structure 
SMLKRISIRYLPFADAASEELPLGQLLRLSLFQISVGMAAVLLLGTLNRVMIVELQVPA
CCHHHCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHH
FLVACMVALPVLIAPFRALLGFKSDTYKSAIGWKRIPYLWFGTLWQFGGLAIMPACLLVL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
GGEVTQVRYDIPYAGEILAALAFVMTGIGMHMTQTAGLALAADRATDETRPRVVALLYVM
CCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCCCCCHHHHHHHHHH
FLVGMGVSAVVIGWFLYEFTPLELIQVIQSCAVLTLILNVTALWKQERIVPTTKAQRAEP
HHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SPTFKEAWSDYASGGTAGRLLAVVFLGTMAFNMQDVLLEPYGGEILGLSVSATTLLTATW
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEEHHHHHHHHHH
AAGALAGFALAAKWLSGGIDPMRMGARGLLAGLVAFCAVIFSNPLGSSELFFVGAFMIGF
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
GGGLFAISTLTAAMTMPTSNKAGRGLALGAWGAAQATAAGLSIAIGGAVHDGVNHLAMSG
CCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHCCCEEEECCHHHHHHHHHHCCC
QLGVALGNEATGYSVVYHLEILLIFATLVALGPLVRTRPRMTTTTNGGAKIGLADLPT
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6744416 [H]