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The map label for this gene is puhA [H]

Identifier: 89052646

GI number: 89052646

Start: 144466

End: 145248

Strand: Reverse

Name: puhA [H]

Synonym: Jann_0155

Alternate gene names: 89052646

Gene position: 145248-144466 (Counterclockwise)

Preceding gene: 89052647

Following gene: 89052645

Centisome position: 3.36

GC content: 60.66

Gene sequence:

>783_bases
ATGGAAAACGCATTCTTCGGGAACTTCGACCTCGCCAGTCTCTCGATCTGGCTGTTCTGGATCTTCTTCGCGCTGCTGAT
CTACTACCTGCAAACGGAAAATATGCGGGAAGGTTATCCGCTGGAAAACGACGACGGCACCGCCGCGCCGAACCAGGGGC
CGTTTCCGGTGCCTGATCCCAAGACCTTCCTGATGCCCCACGGCCGCGCCGATGTGACCGTGCCGAGCGTTGAGAATGAG
CAGGCGCACTACCGCCACAACCTGGATGACGTGATGGAAGCGGGCGCGGTGTCCCACGGGTTCCCCTATGATCCCAAAGG
TGATCCGATGCTGGCCGGTATCGGGTCCGGTGCCTGGACCCCGCGCCGGGATGAGCCGGAGCTGGATGGCCATGGCCACG
TCAAGATCGAGCCGCTGAAGGCCCGCGACGACATGCATGTCAGTGCCGGTAAGAACCCGCTTGGCATGAGGGTCGTGGCG
GGAGACGGTGTTGAGGTCGGCACGATTTCCGACATGTGGATCGACGTGCCTGAGCAATTGGTGCGGTATCTTGAGATCGA
ACTTGATGCAGATCACGGCGGCGGCACGCGGCTTGTGCCAATTCACTTCTGCCAGATCTGGCGTCGCGTCACGATCAACG
CGATCCACGGGACGCACTTCGCCGCTGTGCCGCAGACGAAATCGAACGTCCAGATCACCAAGCTCGAAGAAGAGAAGATC
TCTGCCTATTATGGCGGGGGTATCCTCTACGCCGATGAGAAGCGGGCCGAACCGCTGCTCTGA

Upstream 100 bases:

>100_bases
CCTTGGGCCGCTGGTCCGCACACGACCACGGATGACCACCACCACGAATGGGGGGGCGAAAATCGGCCTCGCCGACCTCC
CTACGTAAAGGACTCTCAAG

Downstream 100 bases:

>100_bases
CCCAAGCCGAAACGCCTGCTCCTAGACCAAGCAGGCTTTGAGACCCGAAGGAGAAACGACCGATGTCGCATGACCACGAC
GATTTCCAGACCGAGCCGGT

Product: photosynthetic reaction center subunit H

Products: NA

Alternate protein names: Photosynthetic reaction center H subunit [H]

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MENAFFGNFDLASLSIWLFWIFFALLIYYLQTENMREGYPLENDDGTAAPNQGPFPVPDPKTFLMPHGRADVTVPSVENE
QAHYRHNLDDVMEAGAVSHGFPYDPKGDPMLAGIGSGAWTPRRDEPELDGHGHVKIEPLKARDDMHVSAGKNPLGMRVVA
GDGVEVGTISDMWIDVPEQLVRYLEIELDADHGGGTRLVPIHFCQIWRRVTINAIHGTHFAAVPQTKSNVQITKLEEEKI
SAYYGGGILYADEKRAEPLL

Sequences:

>Translated_260_residues
MENAFFGNFDLASLSIWLFWIFFALLIYYLQTENMREGYPLENDDGTAAPNQGPFPVPDPKTFLMPHGRADVTVPSVENE
QAHYRHNLDDVMEAGAVSHGFPYDPKGDPMLAGIGSGAWTPRRDEPELDGHGHVKIEPLKARDDMHVSAGKNPLGMRVVA
GDGVEVGTISDMWIDVPEQLVRYLEIELDADHGGGTRLVPIHFCQIWRRVTINAIHGTHFAAVPQTKSNVQITKLEEEKI
SAYYGGGILYADEKRAEPLL
>Mature_260_residues
MENAFFGNFDLASLSIWLFWIFFALLIYYLQTENMREGYPLENDDGTAAPNQGPFPVPDPKTFLMPHGRADVTVPSVENE
QAHYRHNLDDVMEAGAVSHGFPYDPKGDPMLAGIGSGAWTPRRDEPELDGHGHVKIEPLKARDDMHVSAGKNPLGMRVVA
GDGVEVGTISDMWIDVPEQLVRYLEIELDADHGGGTRLVPIHFCQIWRRVTINAIHGTHFAAVPQTKSNVQITKLEEEKI
SAYYGGGILYADEKRAEPLL

Specific function: The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular chromatophore membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the reaction center puhA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005652
- InterPro:   IPR014747
- InterPro:   IPR015810
- InterPro:   IPR007903
- InterPro:   IPR011033 [H]

Pfam domain/function: PF05239 PRC; PF03967 PRCH [H]

EC number: NA

Molecular weight: Translated: 28922; Mature: 28922

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENAFFGNFDLASLSIWLFWIFFALLIYYLQTENMREGYPLENDDGTAAPNQGPFPVPDP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KTFLMPHGRADVTVPSVENEQAHYRHNLDDVMEAGAVSHGFPYDPKGDPMLAGIGSGAWT
CEEEECCCCCCEECCCCCCCHHHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCC
PRRDEPELDGHGHVKIEPLKARDDMHVSAGKNPLGMRVVAGDGVEVGTISDMWIDVPEQL
CCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCEEEEEECCCEEECCCHHHEECCHHHH
VRYLEIELDADHGGGTRLVPIHFCQIWRRVTINAIHGTHFAAVPQTKSNVQITKLEEEKI
HHHEEEEEECCCCCCEEEEHHHHHHHHHHHEEEEEECCEEEECCCCCCCEEEEEECHHHE
SAYYGGGILYADEKRAEPLL
EEEECCEEEEECCCCCCCCC
>Mature Secondary Structure
MENAFFGNFDLASLSIWLFWIFFALLIYYLQTENMREGYPLENDDGTAAPNQGPFPVPDP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KTFLMPHGRADVTVPSVENEQAHYRHNLDDVMEAGAVSHGFPYDPKGDPMLAGIGSGAWT
CEEEECCCCCCEECCCCCCCHHHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCC
PRRDEPELDGHGHVKIEPLKARDDMHVSAGKNPLGMRVVAGDGVEVGTISDMWIDVPEQL
CCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCEEEEEECCCEEECCCHHHEECCHHHH
VRYLEIELDADHGGGTRLVPIHFCQIWRRVTINAIHGTHFAAVPQTKSNVQITKLEEEKI
HHHEEEEEECCCCCCEEEEHHHHHHHHHHHEEEEEECCEEEECCCCCCCEEEEEECHHHE
SAYYGGGILYADEKRAEPLL
EEEECCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6744416 [H]