Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052644

Identifier: 89052644

GI number: 89052644

Start: 143230

End: 143736

Strand: Reverse

Name: 89052644

Synonym: Jann_0153

Alternate gene names: NA

Gene position: 143736-143230 (Counterclockwise)

Preceding gene: 89052645

Following gene: 89052643

Centisome position: 3.33

GC content: 63.12

Gene sequence:

>507_bases
ATGACCCTCACCCCCGCCAAAACGCGCTTCTACAACCGCACCCCTGCGGAACAGAAGCTCGTTGCAAGAGATAAGGAAAT
GGTGCCCGTCGTCCTCGTGCGCGCCATGTTTATCCTGTGCGTCTGCGTGCTGATCATCGTCAGTTACGCCCGTCTGACGG
ATCGCCCCCTCAGCGCCACTGCGCCGACCGTCGAAGAGGTCCCCATCGTGACCGAGCGCCTCGTGCGTATCTACGGAGAG
CTGAACGGCTCGGCCCGTGTGCTGGGTGTGGATGGCAATGTGATCGCCACGTTTGGCGCGGATGAGGGCGGCTTTGTCGC
TGGCGTCTACCGTGTGCTGGAACGTGAAAGAGGCGCCGTGGGCGCGATGGCGTCTGACCCCATCCGCGTCGTGCGCTTCG
CCGATGGCCGTATCGGCCTTCGCGATCCGTTGACGGATTTCCGGGCCGAGCTTGTCGGCTTTGGCGCAGACAATGAAGCG
GCGTTTGCGCGCCTGCTGGAGGAATAA

Upstream 100 bases:

>100_bases
TCGGAGGCAGCCCAGACCGCTGTGTCCGAGCCTGATATCCAGATCACCCGCGTGCCTGAAATGGCCGCTCAACCCGCGGA
ATGAAGGAGGAGAACGACCA

Downstream 100 bases:

>100_bases
ACCATGGGACTTTTGACACGCGATTTCGAGATGGCGCCTTGCGAAGTGGAAGTCAGCCACTGCTTTGACAGCCTGCATGC
GCACGTGAAGTTTCTGAACG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF162B [H]

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTLTPAKTRFYNRTPAEQKLVARDKEMVPVVLVRAMFILCVCVLIIVSYARLTDRPLSATAPTVEEVPIVTERLVRIYGE
LNGSARVLGVDGNVIATFGADEGGFVAGVYRVLERERGAVGAMASDPIRVVRFADGRIGLRDPLTDFRAELVGFGADNEA
AFARLLEE

Sequences:

>Translated_168_residues
MTLTPAKTRFYNRTPAEQKLVARDKEMVPVVLVRAMFILCVCVLIIVSYARLTDRPLSATAPTVEEVPIVTERLVRIYGE
LNGSARVLGVDGNVIATFGADEGGFVAGVYRVLERERGAVGAMASDPIRVVRFADGRIGLRDPLTDFRAELVGFGADNEA
AFARLLEE
>Mature_167_residues
TLTPAKTRFYNRTPAEQKLVARDKEMVPVVLVRAMFILCVCVLIIVSYARLTDRPLSATAPTVEEVPIVTERLVRIYGEL
NGSARVLGVDGNVIATFGADEGGFVAGVYRVLERERGAVGAMASDPIRVVRFADGRIGLRDPLTDFRAELVGFGADNEAA
FARLLEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017495 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18328; Mature: 18196

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTPAKTRFYNRTPAEQKLVARDKEMVPVVLVRAMFILCVCVLIIVSYARLTDRPLSAT
CCCCCCHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
APTVEEVPIVTERLVRIYGELNGSARVLGVDGNVIATFGADEGGFVAGVYRVLERERGAV
CCCHHHCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCC
GAMASDPIRVVRFADGRIGLRDPLTDFRAELVGFGADNEAAFARLLEE
CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
TLTPAKTRFYNRTPAEQKLVARDKEMVPVVLVRAMFILCVCVLIIVSYARLTDRPLSAT
CCCCCHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
APTVEEVPIVTERLVRIYGELNGSARVLGVDGNVIATFGADEGGFVAGVYRVLERERGAV
CCCHHHCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCC
GAMASDPIRVVRFADGRIGLRDPLTDFRAELVGFGADNEAAFARLLEE
CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA