Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052643

Identifier: 89052643

GI number: 89052643

Start: 142930

End: 143226

Strand: Reverse

Name: 89052643

Synonym: Jann_0152

Alternate gene names: NA

Gene position: 143226-142930 (Counterclockwise)

Preceding gene: 89052644

Following gene: 89052642

Centisome position: 3.32

GC content: 57.91

Gene sequence:

>297_bases
ATGGGACTTTTGACACGCGATTTCGAGATGGCGCCTTGCGAAGTGGAAGTCAGCCACTGCTTTGACAGCCTGCATGCGCA
CGTGAAGTTTCTGAACGGCGCAACCATCAACCCCGGCGACGAAGTGCAAGTGAAGGGCCCGCCCGTGATGGCGCCCTACG
GCGAAGTTGTGCGCGAAGAGCGTATGGCCCGTATCACCCGCGCCTCGAAGCTGGAGCAACTCTGGACCCGGATGACCGGC
GATTTCGAGTTCATGGAGCTTTGCGAATTTTCATTCTCTGAGGAGGTCTCGGTATGA

Upstream 100 bases:

>100_bases
TATCGGCCTTCGCGATCCGTTGACGGATTTCCGGGCCGAGCTTGTCGGCTTTGGCGCAGACAATGAAGCGGCGTTTGCGC
GCCTGCTGGAGGAATAAACC

Downstream 100 bases:

>100_bases
AAGATACAAACCGCACCCACTCCGCCGACGCCGCCACCGTCGAAGAGGCGCTGGCCGCCGACAATCACCAGGGCATCGTT
GACAGCGAAGGCGCGACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MGLLTRDFEMAPCEVEVSHCFDSLHAHVKFLNGATINPGDEVQVKGPPVMAPYGEVVREERMARITRASKLEQLWTRMTG
DFEFMELCEFSFSEEVSV

Sequences:

>Translated_98_residues
MGLLTRDFEMAPCEVEVSHCFDSLHAHVKFLNGATINPGDEVQVKGPPVMAPYGEVVREERMARITRASKLEQLWTRMTG
DFEFMELCEFSFSEEVSV
>Mature_97_residues
GLLTRDFEMAPCEVEVSHCFDSLHAHVKFLNGATINPGDEVQVKGPPVMAPYGEVVREERMARITRASKLEQLWTRMTGD
FEFMELCEFSFSEEVSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11143; Mature: 11012

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLTRDFEMAPCEVEVSHCFDSLHAHVKFLNGATINPGDEVQVKGPPVMAPYGEVVREE
CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHH
RMARITRASKLEQLWTRMTGDFEFMELCEFSFSEEVSV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GLLTRDFEMAPCEVEVSHCFDSLHAHVKFLNGATINPGDEVQVKGPPVMAPYGEVVREE
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHH
RMARITRASKLEQLWTRMTGDFEFMELCEFSFSEEVSV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA