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The map label for this gene is 89052624

Identifier: 89052624

GI number: 89052624

Start: 121806

End: 122600

Strand: Direct

Name: 89052624

Synonym: Jann_0133

Alternate gene names: NA

Gene position: 121806-122600 (Clockwise)

Preceding gene: 89052623

Following gene: 89052625

Centisome position: 2.82

GC content: 62.64

Gene sequence:

>795_bases
TTGCACCCACTCCTCACCGAGCCGTTGATCACCGAGTTTCAAACCAAAGGTGTCACCGTCATCCGTGGCCTCTTCGCGGG
TCATGTCGACGCCATTCGCGCCGGAATCCAGCGCAACATGGATGATCCCGGCCCTTATGCCGCAGAGAACCTGAAAGACG
GCGACACCGGTCGCTTCTTCGACGATTATTGCAATTGGCAGCGCATCCCGGAGTTTGAGGAAGTCATTCGCCAATCTCCC
GCCGCGGAGGTTGCCGCCGATCTGATGCGCTCTGATGCCACGCAGCTCTTCCACGACCATGTGCTGGTCAAGGAGCCCGG
CACCTCCAAGCCCACGCCATGGCATCAGGATGGGCCCTACTACTTTGTCGGCGGGAAGCAGAATGTCAGTTTCTGGGCGC
CGGTCGATCCGGTCACGACCGCGTCTCTGCGCTGCGTTGCAGGGTCTCACATGTGGGAGAAACCCGTGGTGCCCACACGC
TGGCTGAACGAGGATACCTTTTATCCCGACAGTGACGCCTACATCCCCGTGCCCGATCCGGACGCCGAGGGGATGGAGGT
CGTGGAATGGGCGCTGGAGCCGGGCGATGCCGTCGCCTTCAACTACTGGATCCTTCACGGCGCGCGCGGGAACGAGGCAA
GCGCCCGCAGGCGCGCCTTCTCCCTCCGGTTTCTTGGTGACGACGCCTACTACGTGGACCGCCCCGGGCCAACATCCCCT
CCGTTCCCCGACCATGGAATGAAGGCGGGGGACCCGCTTCGCCGGGATTGGTTTCCCACCGTCTTCACTCGCTAA

Upstream 100 bases:

>100_bases
GCCACCGTGATCTTGCGGGCAGAGGCTCGCATCAGTAAAGCCGTCGCGCATCTGCGCTTTGATCCGCAGCTAGCGTTTGA
GTTCTAGGAGGCGCCATCCC

Downstream 100 bases:

>100_bases
CGACACCTGCGAGGAGCGCCCGACAGGGCACGAGGAGGGGTGTCATCCCCGCGCGACAGCGCGCGCCGCTTGCATTCCCC
GCCAATCCCGACAAAAACAC

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: Phytanoyl-CoA Dioxygenase Family Protein; Dioxygenase; Deoxygenase; Phytanoyl-CoA Dioxygenase Superfamily

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MHPLLTEPLITEFQTKGVTVIRGLFAGHVDAIRAGIQRNMDDPGPYAAENLKDGDTGRFFDDYCNWQRIPEFEEVIRQSP
AAEVAADLMRSDATQLFHDHVLVKEPGTSKPTPWHQDGPYYFVGGKQNVSFWAPVDPVTTASLRCVAGSHMWEKPVVPTR
WLNEDTFYPDSDAYIPVPDPDAEGMEVVEWALEPGDAVAFNYWILHGARGNEASARRRAFSLRFLGDDAYYVDRPGPTSP
PFPDHGMKAGDPLRRDWFPTVFTR

Sequences:

>Translated_264_residues
MHPLLTEPLITEFQTKGVTVIRGLFAGHVDAIRAGIQRNMDDPGPYAAENLKDGDTGRFFDDYCNWQRIPEFEEVIRQSP
AAEVAADLMRSDATQLFHDHVLVKEPGTSKPTPWHQDGPYYFVGGKQNVSFWAPVDPVTTASLRCVAGSHMWEKPVVPTR
WLNEDTFYPDSDAYIPVPDPDAEGMEVVEWALEPGDAVAFNYWILHGARGNEASARRRAFSLRFLGDDAYYVDRPGPTSP
PFPDHGMKAGDPLRRDWFPTVFTR
>Mature_264_residues
MHPLLTEPLITEFQTKGVTVIRGLFAGHVDAIRAGIQRNMDDPGPYAAENLKDGDTGRFFDDYCNWQRIPEFEEVIRQSP
AAEVAADLMRSDATQLFHDHVLVKEPGTSKPTPWHQDGPYYFVGGKQNVSFWAPVDPVTTASLRCVAGSHMWEKPVVPTR
WLNEDTFYPDSDAYIPVPDPDAEGMEVVEWALEPGDAVAFNYWILHGARGNEASARRRAFSLRFLGDDAYYVDRPGPTSP
PFPDHGMKAGDPLRRDWFPTVFTR

Specific function: Unknown

COG id: COG5285

COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29722; Mature: 29722

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPLLTEPLITEFQTKGVTVIRGLFAGHVDAIRAGIQRNMDDPGPYAAENLKDGDTGRFF
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCH
DDYCNWQRIPEFEEVIRQSPAAEVAADLMRSDATQLFHDHVLVKEPGTSKPTPWHQDGPY
HHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCE
YFVGGKQNVSFWAPVDPVTTASLRCVAGSHMWEKPVVPTRWLNEDTFYPDSDAYIPVPDP
EEECCCCCCEEECCCCCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
DAEGMEVVEWALEPGDAVAFNYWILHGARGNEASARRRAFSLRFLGDDAYYVDRPGPTSP
CCCCHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHEEEEEEECCCCEEECCCCCCCC
PFPDHGMKAGDPLRRDWFPTVFTR
CCCCCCCCCCCCHHHCCCCHHCCC
>Mature Secondary Structure
MHPLLTEPLITEFQTKGVTVIRGLFAGHVDAIRAGIQRNMDDPGPYAAENLKDGDTGRFF
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCH
DDYCNWQRIPEFEEVIRQSPAAEVAADLMRSDATQLFHDHVLVKEPGTSKPTPWHQDGPY
HHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCE
YFVGGKQNVSFWAPVDPVTTASLRCVAGSHMWEKPVVPTRWLNEDTFYPDSDAYIPVPDP
EEECCCCCCEEECCCCCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
DAEGMEVVEWALEPGDAVAFNYWILHGARGNEASARRRAFSLRFLGDDAYYVDRPGPTSP
CCCCHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHEEEEEEECCCCEEECCCCCCCC
PFPDHGMKAGDPLRRDWFPTVFTR
CCCCCCCCCCCCHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA