| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052589
Identifier: 89052589
GI number: 89052589
Start: 92239
End: 92544
Strand: Direct
Name: 89052589
Synonym: Jann_0098
Alternate gene names: NA
Gene position: 92239-92544 (Clockwise)
Preceding gene: 89052588
Following gene: 89052590
Centisome position: 2.14
GC content: 59.48
Gene sequence:
>306_bases ATGATGGCAACGGTCTCAGCACGTCCGCTCCTTCTCACGGCGCAAGCTGGCTTTCTTGGCCTGATGCTTATCCGGGCATT CAACCGCGATACGATGGTGGCAGCGGCGACAATCGCAACCAGCCTTGGCGCGCGGGCCGTCGCCACACCCCTTATGGGGC GATCCGGATTCTATCAGTCAGACCGGTTTCTGATGCTGATGTCCCGATTGTGGTTGCCCGTGGTCCCGTTCGTAATGGTT GGCATTACCCTGATCTTTGCCCCCGTGCGTAGTGGCCTATCGCAACCGTTGACGTCGCGCACATGA
Upstream 100 bases:
>100_bases GTCGTGGACCAGATCGCATGAAGTTCCGACATTTACCCATTTATAGAATGAGCATTCTCTATCGTGAGGCCACCATGTTC AGAGCGCTGGAGGTCTCACG
Downstream 100 bases:
>100_bases TGGCCGGTGCCGTCGGCAAACAGGCCAGCTTCAACCGCACTATCGAGGCGGGCGGTCCCGAGTTCCTGACATGGGAACAG GTCGCTGGTCTGTTGTCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MMATVSARPLLLTAQAGFLGLMLIRAFNRDTMVAAATIATSLGARAVATPLMGRSGFYQSDRFLMLMSRLWLPVVPFVMV GITLIFAPVRSGLSQPLTSRT
Sequences:
>Translated_101_residues MMATVSARPLLLTAQAGFLGLMLIRAFNRDTMVAAATIATSLGARAVATPLMGRSGFYQSDRFLMLMSRLWLPVVPFVMV GITLIFAPVRSGLSQPLTSRT >Mature_101_residues MMATVSARPLLLTAQAGFLGLMLIRAFNRDTMVAAATIATSLGARAVATPLMGRSGFYQSDRFLMLMSRLWLPVVPFVMV GITLIFAPVRSGLSQPLTSRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10890; Mature: 10890
Theoretical pI: Translated: 12.60; Mature: 12.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.9 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.9 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMATVSARPLLLTAQAGFLGLMLIRAFNRDTMVAAATIATSLGARAVATPLMGRSGFYQS CCCCCCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCC DRFLMLMSRLWLPVVPFVMVGITLIFAPVRSGLSQPLTSRT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MMATVSARPLLLTAQAGFLGLMLIRAFNRDTMVAAATIATSLGARAVATPLMGRSGFYQS CCCCCCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCC DRFLMLMSRLWLPVVPFVMVGITLIFAPVRSGLSQPLTSRT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA