| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is hslO [H]
Identifier: 89052570
GI number: 89052570
Start: 73266
End: 74267
Strand: Direct
Name: hslO [H]
Synonym: Jann_0079
Alternate gene names: 89052570
Gene position: 73266-74267 (Clockwise)
Preceding gene: 89052564
Following gene: 89052571
Centisome position: 1.7
GC content: 62.87
Gene sequence:
>1002_bases ATGACGACAACCACAAAACTCGCGTGGGACGACACGGTGTTGCCTTTCCAGCTGGACCGGTCCGATATCCGCGGTCGCGT GGCGCGGTTGGATTCGACGCTGGACCAGATCCTGTCCCAGCACGATTACCCGGCGCCGGTGGAGGCGATGGTGGCCGAGA TGGCTCTGCTGACGGCCTTGATTGGACAAACGATCAAGCTGCGCTGGAAGCTGTCGTTGCAGGTGCGCAGCGACGGGCCG ATCCGCCTGATCGCCACGGATTTCCTTGCGCCCGAGGCGGAGGGAGAGCCCGCGCGCATCCGGGCCTATGCCTCTTATGA TGAGGATCGGCTGGATGTGGCGGCGGACGCGTTTCCGCAAATCGGCGCGGGCTATTTCGCAATCCTGATCGACCAGGGCA ACGATATGACCCCCTATCAGGGCATCACGCCCATTGCCGGTGGGTCCCTTCGGTCCTGTGCGGAGGCGTATTTCGCCCAG TCCGAGCAATTGCCGACGTCGTTCATGCTGTCCTATGGGCAGGCGCAGGAGCCGGGCAAGGATGCATCCTGGCGCGCCGG CGGCGTCATGTTGCAGGTGATGCCAGAGGCCGCGCTGGAGGTCAGGGATGCGCCCTCGGGCGAAGATGGATTGCTGTCTG CGGAAGATCTGATGGAAGAGGACAAGGCCGAGGATTGGACCCGCGCCAATGTCCTTTTGCAGACGACCGAGGCGATGGAG CTGATCGGGCCGCATGTTGCGCCCACGGATCTTCTGGTGCGTCTGTTTCATGAAGAACACCCCCGTGTGTTCGACGCCCT GCCGGTGGCCTTTGGCTGCACCTGTTCCGAGGATCGCGTGCGGCAATCCCTGTCGATCTATTCGGCCAAGGACATTGCCC ACATGACCACGGATACGGGCCGTGTGACGGCGGATTGCCAGTTCTGCGGGTCCCACTACGACTTCGATCCCCTCACGCTG GGGTTCGAGGCTGAGAAAGCACCCGATGGGTCGCCTGCTTAA
Upstream 100 bases:
>100_bases CAGAACTGCCACGGGCGCGCCATCGGGGGGTTTGGTGTTGCCCATGCCGCCCCTATATGGGACCAGACTTTCCAATATTT GGTAAAAGGGGGTGCTCCCC
Downstream 100 bases:
>100_bases GCTGGGTGACATGGTGGCCGCGCTGGATGCTGTTCCGGCGCGACCGTCCTCGGACTATGACCTCAACCCCGGCGTTGTTC TGCCAGAGGGGCGCAAGCTG
Product: Hsp33 protein
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTTTTKLAWDDTVLPFQLDRSDIRGRVARLDSTLDQILSQHDYPAPVEAMVAEMALLTALIGQTIKLRWKLSLQVRSDGP IRLIATDFLAPEAEGEPARIRAYASYDEDRLDVAADAFPQIGAGYFAILIDQGNDMTPYQGITPIAGGSLRSCAEAYFAQ SEQLPTSFMLSYGQAQEPGKDASWRAGGVMLQVMPEAALEVRDAPSGEDGLLSAEDLMEEDKAEDWTRANVLLQTTEAME LIGPHVAPTDLLVRLFHEEHPRVFDALPVAFGCTCSEDRVRQSLSIYSAKDIAHMTTDTGRVTADCQFCGSHYDFDPLTL GFEAEKAPDGSPA
Sequences:
>Translated_333_residues MTTTTKLAWDDTVLPFQLDRSDIRGRVARLDSTLDQILSQHDYPAPVEAMVAEMALLTALIGQTIKLRWKLSLQVRSDGP IRLIATDFLAPEAEGEPARIRAYASYDEDRLDVAADAFPQIGAGYFAILIDQGNDMTPYQGITPIAGGSLRSCAEAYFAQ SEQLPTSFMLSYGQAQEPGKDASWRAGGVMLQVMPEAALEVRDAPSGEDGLLSAEDLMEEDKAEDWTRANVLLQTTEAME LIGPHVAPTDLLVRLFHEEHPRVFDALPVAFGCTCSEDRVRQSLSIYSAKDIAHMTTDTGRVTADCQFCGSHYDFDPLTL GFEAEKAPDGSPA >Mature_332_residues TTTTKLAWDDTVLPFQLDRSDIRGRVARLDSTLDQILSQHDYPAPVEAMVAEMALLTALIGQTIKLRWKLSLQVRSDGPI RLIATDFLAPEAEGEPARIRAYASYDEDRLDVAADAFPQIGAGYFAILIDQGNDMTPYQGITPIAGGSLRSCAEAYFAQS EQLPTSFMLSYGQAQEPGKDASWRAGGVMLQVMPEAALEVRDAPSGEDGLLSAEDLMEEDKAEDWTRANVLLQTTEAMEL IGPHVAPTDLLVRLFHEEHPRVFDALPVAFGCTCSEDRVRQSLSIYSAKDIAHMTTDTGRVTADCQFCGSHYDFDPLTLG FEAEKAPDGSPA
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family [H]
Homologues:
Organism=Escherichia coli, GI87082260, Length=316, Percent_Identity=29.4303797468354, Blast_Score=144, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 [H]
Pfam domain/function: PF01430 HSP33 [H]
EC number: NA
Molecular weight: Translated: 36422; Mature: 36291
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTTKLAWDDTVLPFQLDRSDIRGRVARLDSTLDQILSQHDYPAPVEAMVAEMALLTAL CCCCCEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH IGQTIKLRWKLSLQVRSDGPIRLIATDFLAPEAEGEPARIRAYASYDEDRLDVAADAFPQ HCCEEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCC IGAGYFAILIDQGNDMTPYQGITPIAGGSLRSCAEAYFAQSEQLPTSFMLSYGQAQEPGK CCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC DASWRAGGVMLQVMPEAALEVRDAPSGEDGLLSAEDLMEEDKAEDWTRANVLLQTTEAME CCCCCCCCEEEEECCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHEEEEHHHHHH LIGPHVAPTDLLVRLFHEEHPRVFDALPVAFGCTCSEDRVRQSLSIYSAKDIAHMTTDTG HHCCCCCHHHHHHHHHHHCCCCHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCC RVTADCQFCGSHYDFDPLTLGFEAEKAPDGSPA CEEEEHHCCCCCCCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure TTTTKLAWDDTVLPFQLDRSDIRGRVARLDSTLDQILSQHDYPAPVEAMVAEMALLTAL CCCCEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH IGQTIKLRWKLSLQVRSDGPIRLIATDFLAPEAEGEPARIRAYASYDEDRLDVAADAFPQ HCCEEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCC IGAGYFAILIDQGNDMTPYQGITPIAGGSLRSCAEAYFAQSEQLPTSFMLSYGQAQEPGK CCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC DASWRAGGVMLQVMPEAALEVRDAPSGEDGLLSAEDLMEEDKAEDWTRANVLLQTTEAME CCCCCCCCEEEEECCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHEEEEHHHHHH LIGPHVAPTDLLVRLFHEEHPRVFDALPVAFGCTCSEDRVRQSLSIYSAKDIAHMTTDTG HHCCCCCHHHHHHHHHHHCCCCHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCC RVTADCQFCGSHYDFDPLTLGFEAEKAPDGSPA CEEEEHHCCCCCCCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA