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The map label for this gene is nudL [H]

Identifier: 89052571

GI number: 89052571

Start: 74251

End: 74838

Strand: Direct

Name: nudL [H]

Synonym: Jann_0080

Alternate gene names: 89052571

Gene position: 74251-74838 (Clockwise)

Preceding gene: 89052570

Following gene: 89052572

Centisome position: 1.72

GC content: 65.82

Gene sequence:

>588_bases
ATGGGTCGCCTGCTTAAGCTGGGTGACATGGTGGCCGCGCTGGATGCTGTTCCGGCGCGACCGTCCTCGGACTATGACCT
CAACCCCGGCGTTGTTCTGCCAGAGGGGCGCAAGCTGCGGCCCGCATCTGTGCTGATCGGGGTGCTGGACGGCGACGTGA
TCCTCACCAAGCGCGCCTCCACGCTGAAGCATCACCCGGGCCAGATCGCGTTTCCCGGTGGCAAGGTGGACGATGGCGAA
ACAGCCGAACAAGCCGCCGTCCGGGAAGCGCGTGAAGAGATCGGGCTGGCCCCGGAAAACGTCACGATCCTGCGTCATCT
CCCCCCCCACGAGACGGTGACCGGCTACACTGTCACGCCGTTCCTCGCGCGGATTGACGCGGATTTCTCGCCCACGCCCG
AACCCGGCGAAGTGGCCGAGGTGTTTCGCGTGCCCCTGCACGTCCTGATGGACCCCGCCAACTACGCCATCGAAGGCCGA
CGCTGGCGCGGCATGCGGCGGGAATATTACGTCGTCCCGTTCGGCCCCTATTACATCTGGGGCGCGACGGCGCGAATACT
GAAATCCCTCGCGGATCGGGTGGTGTGA

Upstream 100 bases:

>100_bases
ACCACGGATACGGGCCGTGTGACGGCGGATTGCCAGTTCTGCGGGTCCCACTACGACTTCGATCCCCTCACGCTGGGGTT
CGAGGCTGAGAAAGCACCCG

Downstream 100 bases:

>100_bases
TGCGGCTGGACGCGGACTGGCTACGCAGGCCCGAGACCGGCGCTGTCTTCGATGCGCTGGACGGGCATGGCGTCTGGTTC
GTCGGTGGCTGCGTGCGCAA

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MGRLLKLGDMVAALDAVPARPSSDYDLNPGVVLPEGRKLRPASVLIGVLDGDVILTKRASTLKHHPGQIAFPGGKVDDGE
TAEQAAVREAREEIGLAPENVTILRHLPPHETVTGYTVTPFLARIDADFSPTPEPGEVAEVFRVPLHVLMDPANYAIEGR
RWRGMRREYYVVPFGPYYIWGATARILKSLADRVV

Sequences:

>Translated_195_residues
MGRLLKLGDMVAALDAVPARPSSDYDLNPGVVLPEGRKLRPASVLIGVLDGDVILTKRASTLKHHPGQIAFPGGKVDDGE
TAEQAAVREAREEIGLAPENVTILRHLPPHETVTGYTVTPFLARIDADFSPTPEPGEVAEVFRVPLHVLMDPANYAIEGR
RWRGMRREYYVVPFGPYYIWGATARILKSLADRVV
>Mature_194_residues
GRLLKLGDMVAALDAVPARPSSDYDLNPGVVLPEGRKLRPASVLIGVLDGDVILTKRASTLKHHPGQIAFPGGKVDDGET
AEQAAVREAREEIGLAPENVTILRHLPPHETVTGYTVTPFLARIDADFSPTPEPGEVAEVFRVPLHVLMDPANYAIEGRR
WRGMRREYYVVPFGPYYIWGATARILKSLADRVV

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=141, Percent_Identity=36.8794326241135, Blast_Score=79, Evalue=2e-15,
Organism=Escherichia coli, GI1788115, Length=159, Percent_Identity=34.5911949685535, Blast_Score=77, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17536993, Length=152, Percent_Identity=32.8947368421053, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 21386; Mature: 21255

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRLLKLGDMVAALDAVPARPSSDYDLNPGVVLPEGRKLRPASVLIGVLDGDVILTKRAS
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCHHHEEEEEECCCEEEEECCH
TLKHHPGQIAFPGGKVDDGETAEQAAVREAREEIGLAPENVTILRHLPPHETVTGYTVTP
HHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEHHH
FLARIDADFSPTPEPGEVAEVFRVPLHVLMDPANYAIEGRRWRGMRREYYVVPFGPYYIW
HHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCCEECCHHHCCCCCEEEEEECCCEEEH
GATARILKSLADRVV
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
GRLLKLGDMVAALDAVPARPSSDYDLNPGVVLPEGRKLRPASVLIGVLDGDVILTKRAS
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCHHHEEEEEECCCEEEEECCH
TLKHHPGQIAFPGGKVDDGETAEQAAVREAREEIGLAPENVTILRHLPPHETVTGYTVTP
HHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEHHH
FLARIDADFSPTPEPGEVAEVFRVPLHVLMDPANYAIEGRRWRGMRREYYVVPFGPYYIW
HHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCCEECCHHHCCCCCEEEEEECCCEEEH
GATARILKSLADRVV
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA