Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052563

Identifier: 89052563

GI number: 89052563

Start: 66479

End: 66922

Strand: Reverse

Name: 89052563

Synonym: Jann_0072

Alternate gene names: NA

Gene position: 66922-66479 (Counterclockwise)

Preceding gene: 89052565

Following gene: 89052561

Centisome position: 1.55

GC content: 61.94

Gene sequence:

>444_bases
ATGAACAGACGTTTTGGACGATGGCCGGAGCACGGCCGCAAATACCCTCCGCGCCCCGGTATTTATGTGATCATTGACGC
GGGCGATGGCCTTTTGGCGAGCTTTCAGGAAGCGCCATATCCAGAGTTGCAATTGCCAGGCGGTGGGATTGACCCCGGTG
AGCAGCCACTCGCCGCGCTGCATCGGGAAGTGATGGAGGAGACCGGCTACCGCATCCATTCTTTGCGGCGTCTGGGGATG
TGCCACCGCTACACGTTCATGCCCGATTACGACCGCTACGCACACAAGCAGTGCCACATCTATGCCGCGCGCCTGGGGCG
TCGTTGGTCCGCGCCGACGGAGCCGGGGCATACGGCCGTGTTTCTGCCTTGGGATGTGGCTTTGGACAAGCTGGCCGTTG
CGGGTGATCGCCATTTCGTCGCGCGATATCTGGCGGGAGCGTAG

Upstream 100 bases:

>100_bases
GGGGGTGTTCGTTTGACATACGCGCCCTTTAGCCGACACCGATGCGCTTGGCGAGAGGATTGGCTTTTCGCCTCGGCTCG
CCCGTGGCACAACAGACGCC

Downstream 100 bases:

>100_bases
GGGGCAAGGCGGCTCCGACCTTCGCCCGTCGCCTTATGGGGCCCCGCGGAAGGAGAACAGCAGGGCTGAGAGGTCGTCGG
GAAAATCCGTCGTGCCTGCG

Product: NUDIX hydrolase

Products: NA

Alternate protein names: Hydrolase Nudix Family; Nudix Hydrolase; NUDIX Family Hydrolase; Hydrolase NUDIX Family; NUDIX Superfamily Hydrolase

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNRRFGRWPEHGRKYPPRPGIYVIIDAGDGLLASFQEAPYPELQLPGGGIDPGEQPLAALHREVMEETGYRIHSLRRLGM
CHRYTFMPDYDRYAHKQCHIYAARLGRRWSAPTEPGHTAVFLPWDVALDKLAVAGDRHFVARYLAGA

Sequences:

>Translated_147_residues
MNRRFGRWPEHGRKYPPRPGIYVIIDAGDGLLASFQEAPYPELQLPGGGIDPGEQPLAALHREVMEETGYRIHSLRRLGM
CHRYTFMPDYDRYAHKQCHIYAARLGRRWSAPTEPGHTAVFLPWDVALDKLAVAGDRHFVARYLAGA
>Mature_147_residues
MNRRFGRWPEHGRKYPPRPGIYVIIDAGDGLLASFQEAPYPELQLPGGGIDPGEQPLAALHREVMEETGYRIHSLRRLGM
CHRYTFMPDYDRYAHKQCHIYAARLGRRWSAPTEPGHTAVFLPWDVALDKLAVAGDRHFVARYLAGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16739; Mature: 16739

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRFGRWPEHGRKYPPRPGIYVIIDAGDGLLASFQEAPYPELQLPGGGIDPGEQPLAAL
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCCCCHHHHHH
HREVMEETGYRIHSLRRLGMCHRYTFMPDYDRYAHKQCHIYAARLGRRWSAPTEPGHTAV
HHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
FLPWDVALDKLAVAGDRHFVARYLAGA
EEEHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MNRRFGRWPEHGRKYPPRPGIYVIIDAGDGLLASFQEAPYPELQLPGGGIDPGEQPLAAL
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCCCCHHHHHH
HREVMEETGYRIHSLRRLGMCHRYTFMPDYDRYAHKQCHIYAARLGRRWSAPTEPGHTAV
HHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
FLPWDVALDKLAVAGDRHFVARYLAGA
EEEHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA