| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052563
Identifier: 89052563
GI number: 89052563
Start: 66479
End: 66922
Strand: Reverse
Name: 89052563
Synonym: Jann_0072
Alternate gene names: NA
Gene position: 66922-66479 (Counterclockwise)
Preceding gene: 89052565
Following gene: 89052561
Centisome position: 1.55
GC content: 61.94
Gene sequence:
>444_bases ATGAACAGACGTTTTGGACGATGGCCGGAGCACGGCCGCAAATACCCTCCGCGCCCCGGTATTTATGTGATCATTGACGC GGGCGATGGCCTTTTGGCGAGCTTTCAGGAAGCGCCATATCCAGAGTTGCAATTGCCAGGCGGTGGGATTGACCCCGGTG AGCAGCCACTCGCCGCGCTGCATCGGGAAGTGATGGAGGAGACCGGCTACCGCATCCATTCTTTGCGGCGTCTGGGGATG TGCCACCGCTACACGTTCATGCCCGATTACGACCGCTACGCACACAAGCAGTGCCACATCTATGCCGCGCGCCTGGGGCG TCGTTGGTCCGCGCCGACGGAGCCGGGGCATACGGCCGTGTTTCTGCCTTGGGATGTGGCTTTGGACAAGCTGGCCGTTG CGGGTGATCGCCATTTCGTCGCGCGATATCTGGCGGGAGCGTAG
Upstream 100 bases:
>100_bases GGGGGTGTTCGTTTGACATACGCGCCCTTTAGCCGACACCGATGCGCTTGGCGAGAGGATTGGCTTTTCGCCTCGGCTCG CCCGTGGCACAACAGACGCC
Downstream 100 bases:
>100_bases GGGGCAAGGCGGCTCCGACCTTCGCCCGTCGCCTTATGGGGCCCCGCGGAAGGAGAACAGCAGGGCTGAGAGGTCGTCGG GAAAATCCGTCGTGCCTGCG
Product: NUDIX hydrolase
Products: NA
Alternate protein names: Hydrolase Nudix Family; Nudix Hydrolase; NUDIX Family Hydrolase; Hydrolase NUDIX Family; NUDIX Superfamily Hydrolase
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MNRRFGRWPEHGRKYPPRPGIYVIIDAGDGLLASFQEAPYPELQLPGGGIDPGEQPLAALHREVMEETGYRIHSLRRLGM CHRYTFMPDYDRYAHKQCHIYAARLGRRWSAPTEPGHTAVFLPWDVALDKLAVAGDRHFVARYLAGA
Sequences:
>Translated_147_residues MNRRFGRWPEHGRKYPPRPGIYVIIDAGDGLLASFQEAPYPELQLPGGGIDPGEQPLAALHREVMEETGYRIHSLRRLGM CHRYTFMPDYDRYAHKQCHIYAARLGRRWSAPTEPGHTAVFLPWDVALDKLAVAGDRHFVARYLAGA >Mature_147_residues MNRRFGRWPEHGRKYPPRPGIYVIIDAGDGLLASFQEAPYPELQLPGGGIDPGEQPLAALHREVMEETGYRIHSLRRLGM CHRYTFMPDYDRYAHKQCHIYAARLGRRWSAPTEPGHTAVFLPWDVALDKLAVAGDRHFVARYLAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16739; Mature: 16739
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRFGRWPEHGRKYPPRPGIYVIIDAGDGLLASFQEAPYPELQLPGGGIDPGEQPLAAL CCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCCCCHHHHHH HREVMEETGYRIHSLRRLGMCHRYTFMPDYDRYAHKQCHIYAARLGRRWSAPTEPGHTAV HHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE FLPWDVALDKLAVAGDRHFVARYLAGA EEEHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MNRRFGRWPEHGRKYPPRPGIYVIIDAGDGLLASFQEAPYPELQLPGGGIDPGEQPLAAL CCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCCCCHHHHHH HREVMEETGYRIHSLRRLGMCHRYTFMPDYDRYAHKQCHIYAARLGRRWSAPTEPGHTAV HHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE FLPWDVALDKLAVAGDRHFVARYLAGA EEEHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA