| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89052565
Identifier: 89052565
GI number: 89052565
Start: 68038
End: 68373
Strand: Reverse
Name: 89052565
Synonym: Jann_0074
Alternate gene names: NA
Gene position: 68373-68038 (Counterclockwise)
Preceding gene: 89052566
Following gene: 89052563
Centisome position: 1.58
GC content: 59.23
Gene sequence:
>336_bases ATGAAACGCTTTGCACTTGCAGCCACTCTCGCCGCCACCGCTTTCGCCGCTCCGGCCTTTGCTGACGGCCACGCGACCAA CTTCGCCATCATGCATTTCAACATGGATGCCGATAACGCCGATCAATTCGTCATGCTGCCCCAGGGTGACACGGTCCAGG TTGATCTGGAGATGGGCACGACGCTGGCCGAAGTTTTCGCACACCTCAACATGAGCGCCGAGACCATGGGCGATCTGGTT GGCCAGAGCGGCACCGTCACGATCCTGGCGTCTGACCCCGCCCATGCCGCTGAAATCTTTAGCCGTCTGATGGAAGAAGG TCGCGGCGAAGAATAA
Upstream 100 bases:
>100_bases AGGCAGTCAGCCAAACGACAGGGTCCACGGACAAGAAAACGGCCCGGTCAGACAGCGCAAGAGACTGACCTAAACGTATG AAACTGAAGGGATACTACCA
Downstream 100 bases:
>100_bases CGCCGCCCCGTGCACACCAGCGGCCCCTGCCTTCGCGGCGGGGGCCGTTTGCGTTTGAGATTATCGGGTTAAGCGAGGCC CGCGCGCAGAAGATCGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MKRFALAATLAATAFAAPAFADGHATNFAIMHFNMDADNADQFVMLPQGDTVQVDLEMGTTLAEVFAHLNMSAETMGDLV GQSGTVTILASDPAHAAEIFSRLMEEGRGEE
Sequences:
>Translated_111_residues MKRFALAATLAATAFAAPAFADGHATNFAIMHFNMDADNADQFVMLPQGDTVQVDLEMGTTLAEVFAHLNMSAETMGDLV GQSGTVTILASDPAHAAEIFSRLMEEGRGEE >Mature_111_residues MKRFALAATLAATAFAAPAFADGHATNFAIMHFNMDADNADQFVMLPQGDTVQVDLEMGTTLAEVFAHLNMSAETMGDLV GQSGTVTILASDPAHAAEIFSRLMEEGRGEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11764; Mature: 11764
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.2 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFALAATLAATAFAAPAFADGHATNFAIMHFNMDADNADQFVMLPQGDTVQVDLEMGT CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCEEEEEECCCC TLAEVFAHLNMSAETMGDLVGQSGTVTILASDPAHAAEIFSRLMEEGRGEE HHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKRFALAATLAATAFAAPAFADGHATNFAIMHFNMDADNADQFVMLPQGDTVQVDLEMGT CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCEEEEEECCCC TLAEVFAHLNMSAETMGDLVGQSGTVTILASDPAHAAEIFSRLMEEGRGEE HHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA