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The map label for this gene is accD

Identifier: 89052551

GI number: 89052551

Start: 55003

End: 55959

Strand: Reverse

Name: accD

Synonym: Jann_0060

Alternate gene names: 89052551

Gene position: 55959-55003 (Counterclockwise)

Preceding gene: 89052552

Following gene: 89052550

Centisome position: 1.3

GC content: 61.55

Gene sequence:

>957_bases
ATGAACTGGATCTCCAACTACGTCCGCCCTCGGATCAACTCCATCTTTTCGCGCCGCGAGACGCCCGAGAACCTGTGGTC
CAAGTGCTCCGAATGCGGGACCATGCTGTTCCACCGAGAGCTGTCAGACAATCTCAACGTCTGCACCAATTGCGATCACC
ATATGGCGTTGACCCCGCGCGACAGGTTCACGGCGCTGTTCGACAACGGCATCTTCACCCAGATCACGGTGCCCGAACCG
CTGACCGACCCGCTCAAATTCCGCGACCAGAAGAAATATCCTGACCGCATGAAAGCCGCCCGGACCGCCACGTCGGAAGC
CGAGGCCATGCTGGTCGCCGAGGGGGAGATGGGCCGTACGCCCATCGTCGCCGCCGCCCAGGATTTCTCGTTCATGGGCG
GGTCCATGGGCATGTTTGTGGGAAACGCCATCATCGCGGCAGCGGAACGCGCGGTGGCGTTGAAGCGCCCCCTTATTCTG
TTCTCCGCAGCCGGTGGCGCGCGGATGCAGGAAGGTATCCTGAGCCTCATGCAAATGCCCCGCACCACTGTTGCGGTTCA
GATGCTGAAAGAGGCGAACCTGCCCTACATCGTCGTTCTCACGCATCCAACGACAGGGGGCGTCACCGCCTCCTACGCGA
TGTTGGGCGACGTTCATATCGCGGAGCCCAACGCGCTGATCTGTTTTGCGGGCCCCCGTGTGATCGAGCAGACCATCCGG
GAAAAACTGCCCGAAGGGTTCCAGCGCGCCGAGTACCTGCTGGACCATGGTATGCTGGACCGAGTGACGCACCGCGCCCG
GATGCGCGATGAATTGATCACGATCACCCGTATGTTGATGGGCCAAACCCCTGCAGTCAAAGGGGAACTTCCCGCACCTG
CGCCACTGGAATCTGACGCGGAAACGGCACTTGCCTCCGACACCGATCCAAACGGTGCGCCCCCTTCCAAGGACTAG

Upstream 100 bases:

>100_bases
TGATCCGGCTTGCCGTGACCCGCCTCTGACGCATCGGAGTTTGCAATTCCCCCGCGCGCACAATATTTGCGCTTAAGACA
ATGTTTCGGATAGCGCGCCC

Downstream 100 bases:

>100_bases
CGCTCCGCTCCGTCTTCATCTTGGCCATACAACTCCCGCCGGAGGCTTCCATGGTCTGTCGCCCGGCGCTTCGTTTGCAG
GATATGCCATGACGTCCCAT

Product: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MNWISNYVRPRINSIFSRRETPENLWSKCSECGTMLFHRELSDNLNVCTNCDHHMALTPRDRFTALFDNGIFTQITVPEP
LTDPLKFRDQKKYPDRMKAARTATSEAEAMLVAEGEMGRTPIVAAAQDFSFMGGSMGMFVGNAIIAAAERAVALKRPLIL
FSAAGGARMQEGILSLMQMPRTTVAVQMLKEANLPYIVVLTHPTTGGVTASYAMLGDVHIAEPNALICFAGPRVIEQTIR
EKLPEGFQRAEYLLDHGMLDRVTHRARMRDELITITRMLMGQTPAVKGELPAPAPLESDAETALASDTDPNGAPPSKD

Sequences:

>Translated_318_residues
MNWISNYVRPRINSIFSRRETPENLWSKCSECGTMLFHRELSDNLNVCTNCDHHMALTPRDRFTALFDNGIFTQITVPEP
LTDPLKFRDQKKYPDRMKAARTATSEAEAMLVAEGEMGRTPIVAAAQDFSFMGGSMGMFVGNAIIAAAERAVALKRPLIL
FSAAGGARMQEGILSLMQMPRTTVAVQMLKEANLPYIVVLTHPTTGGVTASYAMLGDVHIAEPNALICFAGPRVIEQTIR
EKLPEGFQRAEYLLDHGMLDRVTHRARMRDELITITRMLMGQTPAVKGELPAPAPLESDAETALASDTDPNGAPPSKD
>Mature_318_residues
MNWISNYVRPRINSIFSRRETPENLWSKCSECGTMLFHRELSDNLNVCTNCDHHMALTPRDRFTALFDNGIFTQITVPEP
LTDPLKFRDQKKYPDRMKAARTATSEAEAMLVAEGEMGRTPIVAAAQDFSFMGGSMGMFVGNAIIAAAERAVALKRPLIL
FSAAGGARMQEGILSLMQMPRTTVAVQMLKEANLPYIVVLTHPTTGGVTASYAMLGDVHIAEPNALICFAGPRVIEQTIR
EKLPEGFQRAEYLLDHGMLDRVTHRARMRDELITITRMLMGQTPAVKGELPAPAPLESDAETALASDTDPNGAPPSKD

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family

Homologues:

Organism=Escherichia coli, GI1788655, Length=296, Percent_Identity=50, Blast_Score=293, Evalue=1e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ACCD_JANSC (Q28WD5)

Other databases:

- EMBL:   CP000264
- RefSeq:   YP_508002.1
- ProteinModelPortal:   Q28WD5
- SMR:   Q28WD5
- STRING:   Q28WD5
- GeneID:   3932496
- GenomeReviews:   CP000264_GR
- KEGG:   jan:Jann_0060
- eggNOG:   COG0777
- HOGENOM:   HBG285696
- OMA:   LEHGMVD
- PhylomeDB:   Q28WD5
- ProtClustDB:   CLSK934287
- BioCyc:   JSP290400:JANN_0060-MONOMER
- HAMAP:   MF_01395
- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762
- PRINTS:   PR01070
- TIGRFAMs:   TIGR00515

Pfam domain/function: PF01039 Carboxyl_trans

EC number: =6.4.1.2

Molecular weight: Translated: 35007; Mature: 35007

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWISNYVRPRINSIFSRRETPENLWSKCSECGTMLFHRELSDNLNVCTNCDHHMALTPR
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEECCC
DRFTALFDNGIFTQITVPEPLTDPLKFRDQKKYPDRMKAARTATSEAEAMLVAEGEMGRT
HHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCC
PIVAAAQDFSFMGGSMGMFVGNAIIAAAERAVALKRPLILFSAAGGARMQEGILSLMQMP
CEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCC
RTTVAVQMLKEANLPYIVVLTHPTTGGVTASYAMLGDVHIAEPNALICFAGPRVIEQTIR
HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCEEEECCCEEEEECCHHHHHHHHH
EKLPEGFQRAEYLLDHGMLDRVTHRARMRDELITITRMLMGQTPAVKGELPAPAPLESDA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
ETALASDTDPNGAPPSKD
HHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNWISNYVRPRINSIFSRRETPENLWSKCSECGTMLFHRELSDNLNVCTNCDHHMALTPR
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEECCC
DRFTALFDNGIFTQITVPEPLTDPLKFRDQKKYPDRMKAARTATSEAEAMLVAEGEMGRT
HHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCC
PIVAAAQDFSFMGGSMGMFVGNAIIAAAERAVALKRPLILFSAAGGARMQEGILSLMQMP
CEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCC
RTTVAVQMLKEANLPYIVVLTHPTTGGVTASYAMLGDVHIAEPNALICFAGPRVIEQTIR
HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCEEEECCCEEEEECCHHHHHHHHH
EKLPEGFQRAEYLLDHGMLDRVTHRARMRDELITITRMLMGQTPAVKGELPAPAPLESDA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
ETALASDTDPNGAPPSKD
HHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA