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The map label for this gene is ybfB [H]

Identifier: 89052546

GI number: 89052546

Start: 49859

End: 51106

Strand: Reverse

Name: ybfB [H]

Synonym: Jann_0055

Alternate gene names: 89052546

Gene position: 51106-49859 (Counterclockwise)

Preceding gene: 89052548

Following gene: 89052541

Centisome position: 1.18

GC content: 62.26

Gene sequence:

>1248_bases
ATGGACCGCCAAGCCCCCCTGATGACCCCTGTCCTGATAGGTGGCTGTGCGATTATCCTGATCTGCTTCGCGATCCGTGC
AAGCTTCGGCGTGTTCCAGATCCCCATCGCGGAGGAGTTCGGTTGGCTGCGGGCCGAATTCAGCCTCGCCATCGCGATCC
AGAACCTTGCCTGGGGGATCGGGCAGCCGTTTTTCGGCGCGATTGCCGAGAAATTCGGGGACCGCAAGGCGATTGTCCTG
GGCGTCGCATTCTATGTGGTGGGTCTTTCCGTGTCTGCCTTTGCCGTCACGCCGGGGCAGCATCAGGTGCTGGAATTCCT
TGTCGGGCTTGGCATCGCGGGCACGGGCTTTGGGGTAATCCTTGCTATGGTCGCGCGGGCTGCCTCGGATGAAAACCGCT
CCATGACACTTGGCATCGTCACGGCGGTTGGCTCCGGTGGGCAGATCATCGGCCCGCCCCTGGCCGAGGCGCTTCTGGCC
AGCTTCCCCTGGCAAACTGTGTTTTTGATCTTCGCAGGCATCGTTTTCGCGTCTCTGGTGTTCCTGCCGCTCCTCCGCGC
GCCAGAGCGCCCGTCCTCGCCGGCGCTGGAAGAGACCATGTCCCAGATCCTCGGCAAGGCACTCCGCGACCCCTCGTTCA
CCTTAATCTTCGTGGGCTTCTTCTCCTGCGGCTACCAACTGGGGTTCATCACGGCCCACTTCCCGGCCTTCATCACTGAA
TTCTGCGGCCCAATCGCGCCGGGCGGCGTGTTGCATTCCATCGGGGTGACGACCACATCGGCCCTCGGCGCCCTGGCGAT
CGCGGTCATCGGTGCGGCCAATATCGGCGGCACGCTTCTGGCGGCGTATCTGGGCAAGACCTATTCCAAGAAGAACCTCT
TGGCAGCGATCTACACCGGTCGAACGATTGTCGCGACGATCTTCATCCTGCTGCCCATCACACCCACCTCCGTGATCGTA
TTTTCCGCCGCGATGGGGTCCCTCTGGTTAGCCACCGTTCCGCTGACGAGCGGTCTTGTGGGGTACATCTATGGGCTACG
ATACATGGGAACGCTCTATGGCATCGTGTTCTTCAGCCACCAGTTGGGCAGCTTCATGGGTGTCTGGCTGGGAGGTGCGC
TTTTCGACGCTTACGGGGACTACACCGCTGTTTGGTGGGTCGGGATCGGCGTCGGGGTGCTCAGCGCGATCATCCACTTG
CCGATCAAGGAAACGCCGCTGGGTCTGCGCGCGCCCACACCGGCCTGA

Upstream 100 bases:

>100_bases
GCGTGTTCAGGAAATTGATCAGCGCCGTCACAAGGTCTGATTTGACGCCGCCCGTGCCGCGCGACACAGTCGCGTCACCC
AGTTCCGAAAGATACCTCCC

Downstream 100 bases:

>100_bases
CGCGCTCCTTCATCTTGGCCCTACACCTCCGGGGAGCGCGAAGGGCAGAGCCCCTCGCATCCGGCGACGGCAAAGCCGGC
GCAACACCTCTATCCGCCGC

Product: major facilitator transporter

Products: Proton [Cytoplasm]; drug [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MDRQAPLMTPVLIGGCAIILICFAIRASFGVFQIPIAEEFGWLRAEFSLAIAIQNLAWGIGQPFFGAIAEKFGDRKAIVL
GVAFYVVGLSVSAFAVTPGQHQVLEFLVGLGIAGTGFGVILAMVARAASDENRSMTLGIVTAVGSGGQIIGPPLAEALLA
SFPWQTVFLIFAGIVFASLVFLPLLRAPERPSSPALEETMSQILGKALRDPSFTLIFVGFFSCGYQLGFITAHFPAFITE
FCGPIAPGGVLHSIGVTTTSALGALAIAVIGAANIGGTLLAAYLGKTYSKKNLLAAIYTGRTIVATIFILLPITPTSVIV
FSAAMGSLWLATVPLTSGLVGYIYGLRYMGTLYGIVFFSHQLGSFMGVWLGGALFDAYGDYTAVWWVGIGVGVLSAIIHL
PIKETPLGLRAPTPA

Sequences:

>Translated_415_residues
MDRQAPLMTPVLIGGCAIILICFAIRASFGVFQIPIAEEFGWLRAEFSLAIAIQNLAWGIGQPFFGAIAEKFGDRKAIVL
GVAFYVVGLSVSAFAVTPGQHQVLEFLVGLGIAGTGFGVILAMVARAASDENRSMTLGIVTAVGSGGQIIGPPLAEALLA
SFPWQTVFLIFAGIVFASLVFLPLLRAPERPSSPALEETMSQILGKALRDPSFTLIFVGFFSCGYQLGFITAHFPAFITE
FCGPIAPGGVLHSIGVTTTSALGALAIAVIGAANIGGTLLAAYLGKTYSKKNLLAAIYTGRTIVATIFILLPITPTSVIV
FSAAMGSLWLATVPLTSGLVGYIYGLRYMGTLYGIVFFSHQLGSFMGVWLGGALFDAYGDYTAVWWVGIGVGVLSAIIHL
PIKETPLGLRAPTPA
>Mature_415_residues
MDRQAPLMTPVLIGGCAIILICFAIRASFGVFQIPIAEEFGWLRAEFSLAIAIQNLAWGIGQPFFGAIAEKFGDRKAIVL
GVAFYVVGLSVSAFAVTPGQHQVLEFLVGLGIAGTGFGVILAMVARAASDENRSMTLGIVTAVGSGGQIIGPPLAEALLA
SFPWQTVFLIFAGIVFASLVFLPLLRAPERPSSPALEETMSQILGKALRDPSFTLIFVGFFSCGYQLGFITAHFPAFITE
FCGPIAPGGVLHSIGVTTTSALGALAIAVIGAANIGGTLLAAYLGKTYSKKNLLAAIYTGRTIVATIFILLPITPTSVIV
FSAAMGSLWLATVPLTSGLVGYIYGLRYMGTLYGIVFFSHQLGSFMGVWLGGALFDAYGDYTAVWWVGIGVGVLSAIIHL
PIKETPLGLRAPTPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43506; Mature: 43506

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRQAPLMTPVLIGGCAIILICFAIRASFGVFQIPIAEEFGWLRAEFSLAIAIQNLAWGI
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHC
GQPFFGAIAEKFGDRKAIVLGVAFYVVGLSVSAFAVTPGQHQVLEFLVGLGIAGTGFGVI
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHEEEECCCHHHHHHHHHHCCCCCCHHHHH
LAMVARAASDENRSMTLGIVTAVGSGGQIIGPPLAEALLASFPWQTVFLIFAGIVFASLV
HHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FLPLLRAPERPSSPALEETMSQILGKALRDPSFTLIFVGFFSCGYQLGFITAHFPAFITE
HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHEEHHHHCCHHHHHHHHHHHHHHH
FCGPIAPGGVLHSIGVTTTSALGALAIAVIGAANIGGTLLAAYLGKTYSKKNLLAAIYTG
HCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECC
RTIVATIFILLPITPTSVIVFSAAMGSLWLATVPLTSGLVGYIYGLRYMGTLYGIVFFSH
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGSFMGVWLGGALFDAYGDYTAVWWVGIGVGVLSAIIHLPIKETPLGLRAPTPA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDRQAPLMTPVLIGGCAIILICFAIRASFGVFQIPIAEEFGWLRAEFSLAIAIQNLAWGI
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHC
GQPFFGAIAEKFGDRKAIVLGVAFYVVGLSVSAFAVTPGQHQVLEFLVGLGIAGTGFGVI
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHEEEECCCHHHHHHHHHHCCCCCCHHHHH
LAMVARAASDENRSMTLGIVTAVGSGGQIIGPPLAEALLASFPWQTVFLIFAGIVFASLV
HHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FLPLLRAPERPSSPALEETMSQILGKALRDPSFTLIFVGFFSCGYQLGFITAHFPAFITE
HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHEEHHHHCCHHHHHHHHHHHHHHH
FCGPIAPGGVLHSIGVTTTSALGALAIAVIGAANIGGTLLAAYLGKTYSKKNLLAAIYTG
HCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECC
RTIVATIFILLPITPTSVIVFSAAMGSLWLATVPLTSGLVGYIYGLRYMGTLYGIVFFSH
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGSFMGVWLGGALFDAYGDYTAVWWVGIGVGVLSAIIHLPIKETPLGLRAPTPA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]