| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052536
Identifier: 89052536
GI number: 89052536
Start: 42761
End: 43360
Strand: Direct
Name: 89052536
Synonym: Jann_0045
Alternate gene names: NA
Gene position: 42761-43360 (Clockwise)
Preceding gene: 89052535
Following gene: 89052537
Centisome position: 0.99
GC content: 58.67
Gene sequence:
>600_bases ATGTCCGATCACTACCTTTTTCATCTGACGTTCGACGTTCGCCACGACGCGCCGCCGCAGCTTATGGCCGCCTTGGCAAA GCGGGCGGGCGGGGACGTGCCGTCGACCGAGGATATGGGCGATCTGCCTCCCATCGTGCAGGATTATCTGCGCGGTGGCG GGGTGCCCGGAGATGGCGTCTATTGCTTCTACAATCGCGGGCCGCGGAGCAAGTTCATCGACGGGACGTTGGTCGAGATC GGCTGGGAGCCCCATGAAGGCAGTCATACCCTGCGCATGGCGCAAACCTTCCACGATGACGAATACTGGAATGGCGGCCT CTACTACATCCACTGGCTGTATCAGTTTGTGGCCGACGACGGTCCGATTGGTACGATGCAGCAAACCAACGGCAACGAGC CCGCATCGATCCTGACGAAGGTGGGTGACGATATCATCGAGACGAAATTGGCCTACAACCCCGGAAAATACTGGCCGGGG CCCGGGCAGCCGAAACCTGATCCTGACACGCCCATGATCATCGAAAAAAGCACGGCCTTCCCGCTATCTGAAATGATGGA GGGACTGGCAATGTTCGCAGATGGCCATAGCTACGAATAA
Upstream 100 bases:
>100_bases GATGATCACCCACACCTTGGCGCTGGACAACATCAACGAAGGCTTTGACCTGATGCACCGGGGTGAATCGATCCGCTCCG TGGTGATCTACTGAGCGCCG
Downstream 100 bases:
>100_bases GCCCCTTTTCTCTGAATGCGGCTTTGCCGCTCCCTTTGCCTCGAAAGGAAATGTATATGAAACTCTTCTCTCTCCTGACA GGACTTGGCCTTGCGGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MSDHYLFHLTFDVRHDAPPQLMAALAKRAGGDVPSTEDMGDLPPIVQDYLRGGGVPGDGVYCFYNRGPRSKFIDGTLVEI GWEPHEGSHTLRMAQTFHDDEYWNGGLYYIHWLYQFVADDGPIGTMQQTNGNEPASILTKVGDDIIETKLAYNPGKYWPG PGQPKPDPDTPMIIEKSTAFPLSEMMEGLAMFADGHSYE
Sequences:
>Translated_199_residues MSDHYLFHLTFDVRHDAPPQLMAALAKRAGGDVPSTEDMGDLPPIVQDYLRGGGVPGDGVYCFYNRGPRSKFIDGTLVEI GWEPHEGSHTLRMAQTFHDDEYWNGGLYYIHWLYQFVADDGPIGTMQQTNGNEPASILTKVGDDIIETKLAYNPGKYWPG PGQPKPDPDTPMIIEKSTAFPLSEMMEGLAMFADGHSYE >Mature_198_residues SDHYLFHLTFDVRHDAPPQLMAALAKRAGGDVPSTEDMGDLPPIVQDYLRGGGVPGDGVYCFYNRGPRSKFIDGTLVEIG WEPHEGSHTLRMAQTFHDDEYWNGGLYYIHWLYQFVADDGPIGTMQQTNGNEPASILTKVGDDIIETKLAYNPGKYWPGP GQPKPDPDTPMIIEKSTAFPLSEMMEGLAMFADGHSYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22141; Mature: 22010
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDHYLFHLTFDVRHDAPPQLMAALAKRAGGDVPSTEDMGDLPPIVQDYLRGGGVPGDGV CCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCE YCFYNRGPRSKFIDGTLVEIGWEPHEGSHTLRMAQTFHDDEYWNGGLYYIHWLYQFVADD EEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC GPIGTMQQTNGNEPASILTKVGDDIIETKLAYNPGKYWPGPGQPKPDPDTPMIIEKSTAF CCCCCCCCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCC PLSEMMEGLAMFADGHSYE CHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SDHYLFHLTFDVRHDAPPQLMAALAKRAGGDVPSTEDMGDLPPIVQDYLRGGGVPGDGV CCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCE YCFYNRGPRSKFIDGTLVEIGWEPHEGSHTLRMAQTFHDDEYWNGGLYYIHWLYQFVADD EEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC GPIGTMQQTNGNEPASILTKVGDDIIETKLAYNPGKYWPGPGQPKPDPDTPMIIEKSTAF CCCCCCCCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCC PLSEMMEGLAMFADGHSYE CHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA