| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is sseA [H]
Identifier: 89052521
GI number: 89052521
Start: 27505
End: 28368
Strand: Reverse
Name: sseA [H]
Synonym: Jann_0030
Alternate gene names: 89052521
Gene position: 28368-27505 (Counterclockwise)
Preceding gene: 89052522
Following gene: 89052520
Centisome position: 0.66
GC content: 61.69
Gene sequence:
>864_bases ATGGCCGAGGTGATCACCGGGGACGATCCGCAAACGCTGGTCTCGACTGATTGGCTCGCCGCGCATTTCAACGATCCTGA TCTGCGGATCATCGACGCATCGTATTATCTGGCCGAGATGAACCGGGATGCGAAGGCCGAATATGACGCGGGCCACATCC CCGGCGCGCGGTTTTTCGACATTGATGACATCTCCGACGCGCGATCCGAGCTGCCGCATATGGTGGCCCCGGTGGAGAAG TTCATGTCCCGCATGCGCGCCATGGGCGTGGGCGATGGTCATCAGGTGGTGGTCTATGACGGACGTGGCGTGTTTTCTGC CGCGCGTGTTTGGTGGAACTTTCGTCTGATGGGCAAGACAGATGTCGCGGTCCTGGATGGAGGGCTGCCCAAATGGGTCG CCGAAGGGCGTCCCGTAGAAGATATGCCGCCGATCATCCGGGACCGTCACATGACGGTGCAGCGTCAGGCGCATCTGGTG AAGGATGTCACGCAGGTGGCCTCGGCCAGCAAGCTTGGCGATTGGCAGATCGTGGACGCCCGCGCGCCCGCAAGGTTCCG CGGAGAGGAGCCCGAGACGCGACCCGGCCTGCGGGCTGGCCGTATCCCGAATTCCAAGAACGTCCATTACGCCAGTCTGT TCAAACCCGATGGCACGATGAAAGAAGGCGACGCCCTGCGCGCCGCGTTCGAGGCTGGCGGCGTGGATCTGGACAAGCGG ATCATCACGACTTGTGGATCCGGCGTGACGGCAGCGATCCTGATGCTGGGGCTGACGCGTTTGGGCCATCAGGATGTGTC GCTCTATGATGGATCATGGTCCGAATGGGGCCAGTTTGAGCAGTTGAAGGTCGAAACCGGATGA
Upstream 100 bases:
>100_bases GTATTTACCAAGATGAAGGAGGAGCGTCGCGCGGGCGAGGCTTGCGTGGCTCTGGGCGGCGGCGTAGGACGTTTGGGGTA TTTGGACGGGAGTGCGCAGA
Downstream 100 bases:
>100_bases GCGTGATCCCCGCGGGCACGCAGGTCCCCTTCACGATCACCTATCTGGAAATGACCGCGCGACCCGATTTTGGCCCTGCG CAACTGCCCGGTGACGTGCG
Product: 3-mercaptopyruvate sulfurtransferase
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MAEVITGDDPQTLVSTDWLAAHFNDPDLRIIDASYYLAEMNRDAKAEYDAGHIPGARFFDIDDISDARSELPHMVAPVEK FMSRMRAMGVGDGHQVVVYDGRGVFSAARVWWNFRLMGKTDVAVLDGGLPKWVAEGRPVEDMPPIIRDRHMTVQRQAHLV KDVTQVASASKLGDWQIVDARAPARFRGEEPETRPGLRAGRIPNSKNVHYASLFKPDGTMKEGDALRAAFEAGGVDLDKR IITTCGSGVTAAILMLGLTRLGHQDVSLYDGSWSEWGQFEQLKVETG
Sequences:
>Translated_287_residues MAEVITGDDPQTLVSTDWLAAHFNDPDLRIIDASYYLAEMNRDAKAEYDAGHIPGARFFDIDDISDARSELPHMVAPVEK FMSRMRAMGVGDGHQVVVYDGRGVFSAARVWWNFRLMGKTDVAVLDGGLPKWVAEGRPVEDMPPIIRDRHMTVQRQAHLV KDVTQVASASKLGDWQIVDARAPARFRGEEPETRPGLRAGRIPNSKNVHYASLFKPDGTMKEGDALRAAFEAGGVDLDKR IITTCGSGVTAAILMLGLTRLGHQDVSLYDGSWSEWGQFEQLKVETG >Mature_286_residues AEVITGDDPQTLVSTDWLAAHFNDPDLRIIDASYYLAEMNRDAKAEYDAGHIPGARFFDIDDISDARSELPHMVAPVEKF MSRMRAMGVGDGHQVVVYDGRGVFSAARVWWNFRLMGKTDVAVLDGGLPKWVAEGRPVEDMPPIIRDRHMTVQRQAHLVK DVTQVASASKLGDWQIVDARAPARFRGEEPETRPGLRAGRIPNSKNVHYASLFKPDGTMKEGDALRAAFEAGGVDLDKRI ITTCGSGVTAAILMLGLTRLGHQDVSLYDGSWSEWGQFEQLKVETG
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. Its participation in detoxification of cyanide may be small. May be involved in the enhancement of serine sensitivity [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI194473668, Length=272, Percent_Identity=38.9705882352941, Blast_Score=200, Evalue=1e-51, Organism=Homo sapiens, GI61835204, Length=272, Percent_Identity=38.9705882352941, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI194473681, Length=272, Percent_Identity=38.9705882352941, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI17402865, Length=273, Percent_Identity=38.8278388278388, Blast_Score=179, Evalue=2e-45, Organism=Escherichia coli, GI87082121, Length=274, Percent_Identity=43.4306569343066, Blast_Score=210, Evalue=8e-56, Organism=Escherichia coli, GI87081967, Length=273, Percent_Identity=28.2051282051282, Blast_Score=93, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17561888, Length=290, Percent_Identity=27.2413793103448, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71997283, Length=291, Percent_Identity=25.4295532646048, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17543836, Length=288, Percent_Identity=26.3888888888889, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17543838, Length=288, Percent_Identity=26.3888888888889, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI115534702, Length=233, Percent_Identity=27.4678111587983, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6324825, Length=264, Percent_Identity=31.8181818181818, Blast_Score=127, Evalue=2e-30,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR001307 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 31709; Mature: 31578
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00380 RHODANESE_1 ; PS00683 RHODANESE_2 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVITGDDPQTLVSTDWLAAHFNDPDLRIIDASYYLAEMNRDAKAEYDAGHIPGARFFD CCCCCCCCCCCCEEECCEEEEECCCCCEEEEECHHHEECCCCCCCCCCCCCCCCCCEEEE IDDISDARSELPHMVAPVEKFMSRMRAMGVGDGHQVVVYDGRGVFSAARVWWNFRLMGKT CCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHEEEEEEEEECCC DVAVLDGGLPKWVAEGRPVEDMPPIIRDRHMTVQRQAHLVKDVTQVASASKLGDWQIVDA CEEEECCCCHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC RAPARFRGEEPETRPGLRAGRIPNSKNVHYASLFKPDGTMKEGDALRAAFEAGGVDLDKR CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCHHHH IITTCGSGVTAAILMLGLTRLGHQDVSLYDGSWSEWGQFEQLKVETG HHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCHHCCCEEEEEEECC >Mature Secondary Structure AEVITGDDPQTLVSTDWLAAHFNDPDLRIIDASYYLAEMNRDAKAEYDAGHIPGARFFD CCCCCCCCCCCEEECCEEEEECCCCCEEEEECHHHEECCCCCCCCCCCCCCCCCCEEEE IDDISDARSELPHMVAPVEKFMSRMRAMGVGDGHQVVVYDGRGVFSAARVWWNFRLMGKT CCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHEEEEEEEEECCC DVAVLDGGLPKWVAEGRPVEDMPPIIRDRHMTVQRQAHLVKDVTQVASASKLGDWQIVDA CEEEECCCCHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC RAPARFRGEEPETRPGLRAGRIPNSKNVHYASLFKPDGTMKEGDALRAAFEAGGVDLDKR CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCHHHH IITTCGSGVTAAILMLGLTRLGHQDVSLYDGSWSEWGQFEQLKVETG HHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCHHCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]