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The map label for this gene is yaeJ [C]

Identifier: 89052517

GI number: 89052517

Start: 24321

End: 24740

Strand: Reverse

Name: yaeJ [C]

Synonym: Jann_0026

Alternate gene names: 89052517

Gene position: 24740-24321 (Counterclockwise)

Preceding gene: 89052518

Following gene: 89052516

Centisome position: 0.57

GC content: 68.1

Gene sequence:

>420_bases
ATGCCCCTTCGCATCACCGACCAAATCACGCTGGAAGACTGGGAACTGACGGAGCAATTCGTGAGGGCCTCGGGTCCCGG
CGGGCAGAACGTCAACAAGGTGTCGAGCGCCGTCGAGTTGCGGTTCGAGGCCGAGCGGTCTCCGGCTCTGTCGGACGCGG
TGAAACGGCGGCTGAAGCGGCTGGCGGGACGGCGCTGGACAAAGGACGGCGCGGTGGTACTTCAGGTGTCCGAGGAGCGG
AGCCAGGCCCGGAATCGCGAGTTGGCCCGCGAGCGGCTGGCGGAGCTGGTGCGCTCCGCGACGGCGGTGCCGAAACGCCG
CGTGAAGACGCGGGTGTCGCAGAACCAGAAGCGGAAGCGGGTGGAGGCGAAGAAGCGGCGCGGGGAAGTGAAGGCGCTGC
GGGGTGGTGTTGAGGAGTGA

Upstream 100 bases:

>100_bases
AAAGGGCTGCTCACCTTGGGCAGCCCTTTTTCGTTGGAAAACGGGTGTAAAGAACCTGTAGTGATCCCGTAGTTTTTCTG
TAGTTACACATTGTAGTGCT

Downstream 100 bases:

>100_bases
GTTGACATTTTGCAATAGTATACCAAATATTGGTACTAGTACTACAGGAGGCTTTGTTATGGCGCGCAATACATCGGTCT
CACTCGGGGATCACTTCGGA

Product: peptidyl-tRNA hydrolase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MPLRITDQITLEDWELTEQFVRASGPGGQNVNKVSSAVELRFEAERSPALSDAVKRRLKRLAGRRWTKDGAVVLQVSEER
SQARNRELARERLAELVRSATAVPKRRVKTRVSQNQKRKRVEAKKRRGEVKALRGGVEE

Sequences:

>Translated_139_residues
MPLRITDQITLEDWELTEQFVRASGPGGQNVNKVSSAVELRFEAERSPALSDAVKRRLKRLAGRRWTKDGAVVLQVSEER
SQARNRELARERLAELVRSATAVPKRRVKTRVSQNQKRKRVEAKKRRGEVKALRGGVEE
>Mature_138_residues
PLRITDQITLEDWELTEQFVRASGPGGQNVNKVSSAVELRFEAERSPALSDAVKRRLKRLAGRRWTKDGAVVLQVSEERS
QARNRELARERLAELVRSATAVPKRRVKTRVSQNQKRKRVEAKKRRGEVKALRGGVEE

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=133, Percent_Identity=37.593984962406, Blast_Score=86, Evalue=1e-18,
Organism=Drosophila melanogaster, GI19921098, Length=135, Percent_Identity=32.5925925925926, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15870; Mature: 15739

Theoretical pI: Translated: 11.82; Mature: 11.82

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLRITDQITLEDWELTEQFVRASGPGGQNVNKVSSAVELRFEAERSPALSDAVKRRLKR
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LAGRRWTKDGAVVLQVSEERSQARNRELARERLAELVRSATAVPKRRVKTRVSQNQKRKR
HHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
VEAKKRRGEVKALRGGVEE
HHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PLRITDQITLEDWELTEQFVRASGPGGQNVNKVSSAVELRFEAERSPALSDAVKRRLKR
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LAGRRWTKDGAVVLQVSEERSQARNRELARERLAELVRSATAVPKRRVKTRVSQNQKRKR
HHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
VEAKKRRGEVKALRGGVEE
HHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]