| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658578
Identifier: 88658578
GI number: 88658578
Start: 644823
End: 645710
Strand: Reverse
Name: 88658578
Synonym: ECH_0640
Alternate gene names: NA
Gene position: 645710-644823 (Counterclockwise)
Preceding gene: 88657609
Following gene: 88658472
Centisome position: 54.9
GC content: 30.63
Gene sequence:
>888_bases TTGATGCCATTGTTACATACTGTACGTGAAAAAGAAGGTAGTCAGCAAATTGTTAAACTTTATAGGAAAAATAGTCTTAT TTTTCTAAGAAAAGTTGTTATGGGTATTAGGAAGATTGCTACGAAGAGTTGGTATAACATTCCAAAAGAGCAACAAGTTA GTATGGATATTTTTCGTAAACCTATATTATCAATGACAGCTACAGGTGTAATGCAATATAGCCAAGGATATGATATAGTT TATAAAGAAATTAGTTTTAAGAATAAACTAAATGTTGAGGTATTTTATCGAAATTGTTTATTGGATATAAAATGGTTTTC TTTAGCAGAACGACGATATCATACAAGGTTTATCAGGGAAAAAAATAGACCTGTACTCTGTTCTTATGATGGTCAAATAT ATAGTACAAATAGTAAAGTTGCATATGTAATTACGTTAGAGGGAAATTTAATAACTCATGATCATATAGTATGTGATCGT ACTCAAGGTCAAACATATTTTCATTCAACATTAGCTGCGGGTATGCCTGTAATATGTGCTGGTTTACTAAGTGTCAGTAA TGGTATTATTCATTATATTAGTAATGAAAGTGGACATTATAAGCCTGGAATAGGCAATTTATATAATGCTGTGAAATTAT TAGATAAAGTGATTTCTCTAGATTGCATAATATGTGTTATTGGATTTGCAGTTAATGAAGAAACTAAAAAGTTACGTACA GTTTATCAGGCTAGGGTTAAGGGAAGTTTTTTAGTAGATATGGAGAGTGTTGGTAAAGATGGTTTGACTATTCCTGAAAG ATATTTTTCGATTATAAGGAAAGACAATGATAATTATAAAAAACGCCTGATTCAAGCAGCAAACAGCCATAATGTGCAAG CACGCTAA
Upstream 100 bases:
>100_bases TTTATTCCTTTAATTTTTTTATTGTTAAAAGGGTTATTATAATATTTACTATATAAATGAATTAATATAATATTTAAATA AACTTATTATATTTATAATA
Downstream 100 bases:
>100_bases TATTACGTTATTTGAGATCGATACGGATTTTCTAAATATAAAATACTGTATGGGCATAGAGTATTTAAAATAAGTATATA TACTGAATATGTTTTGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MMPLLHTVREKEGSQQIVKLYRKNSLIFLRKVVMGIRKIATKSWYNIPKEQQVSMDIFRKPILSMTATGVMQYSQGYDIV YKEISFKNKLNVEVFYRNCLLDIKWFSLAERRYHTRFIREKNRPVLCSYDGQIYSTNSKVAYVITLEGNLITHDHIVCDR TQGQTYFHSTLAAGMPVICAGLLSVSNGIIHYISNESGHYKPGIGNLYNAVKLLDKVISLDCIICVIGFAVNEETKKLRT VYQARVKGSFLVDMESVGKDGLTIPERYFSIIRKDNDNYKKRLIQAANSHNVQAR
Sequences:
>Translated_295_residues MMPLLHTVREKEGSQQIVKLYRKNSLIFLRKVVMGIRKIATKSWYNIPKEQQVSMDIFRKPILSMTATGVMQYSQGYDIV YKEISFKNKLNVEVFYRNCLLDIKWFSLAERRYHTRFIREKNRPVLCSYDGQIYSTNSKVAYVITLEGNLITHDHIVCDR TQGQTYFHSTLAAGMPVICAGLLSVSNGIIHYISNESGHYKPGIGNLYNAVKLLDKVISLDCIICVIGFAVNEETKKLRT VYQARVKGSFLVDMESVGKDGLTIPERYFSIIRKDNDNYKKRLIQAANSHNVQAR >Mature_295_residues MMPLLHTVREKEGSQQIVKLYRKNSLIFLRKVVMGIRKIATKSWYNIPKEQQVSMDIFRKPILSMTATGVMQYSQGYDIV YKEISFKNKLNVEVFYRNCLLDIKWFSLAERRYHTRFIREKNRPVLCSYDGQIYSTNSKVAYVITLEGNLITHDHIVCDR TQGQTYFHSTLAAGMPVICAGLLSVSNGIIHYISNESGHYKPGIGNLYNAVKLLDKVISLDCIICVIGFAVNEETKKLRT VYQARVKGSFLVDMESVGKDGLTIPERYFSIIRKDNDNYKKRLIQAANSHNVQAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33908; Mature: 33908
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPLLHTVREKEGSQQIVKLYRKNSLIFLRKVVMGIRKIATKSWYNIPKEQQVSMDIFRK CCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH PILSMTATGVMQYSQGYDIVYKEISFKNKLNVEVFYRNCLLDIKWFSLAERRYHTRFIRE HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEHEEEHHHHHHHHHHHHHHHHHC KNRPVLCSYDGQIYSTNSKVAYVITLEGNLITHDHIVCDRTQGQTYFHSTLAAGMPVICA CCCCEEEECCCEEEECCCCEEEEEEEECCEEECCCEEEECCCCCHHHHHHHHCCHHHHHH GLLSVSNGIIHYISNESGHYKPGIGNLYNAVKLLDKVISLDCIICVIGFAVNEETKKLRT HHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VYQARVKGSFLVDMESVGKDGLTIPERYFSIIRKDNDNYKKRLIQAANSHNVQAR HHHHHHCCCEEEEHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MMPLLHTVREKEGSQQIVKLYRKNSLIFLRKVVMGIRKIATKSWYNIPKEQQVSMDIFRK CCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH PILSMTATGVMQYSQGYDIVYKEISFKNKLNVEVFYRNCLLDIKWFSLAERRYHTRFIRE HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEHEEEHHHHHHHHHHHHHHHHHC KNRPVLCSYDGQIYSTNSKVAYVITLEGNLITHDHIVCDRTQGQTYFHSTLAAGMPVICA CCCCEEEECCCEEEECCCCEEEEEEEECCEEECCCEEEECCCCCHHHHHHHHCCHHHHHH GLLSVSNGIIHYISNESGHYKPGIGNLYNAVKLLDKVISLDCIICVIGFAVNEETKKLRT HHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VYQARVKGSFLVDMESVGKDGLTIPERYFSIIRKDNDNYKKRLIQAANSHNVQAR HHHHHHCCCEEEEHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA