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The map label for this gene is ynbB [H]

Identifier: 88658570

GI number: 88658570

Start: 252771

End: 253406

Strand: Direct

Name: ynbB [H]

Synonym: ECH_0269

Alternate gene names: 88658570

Gene position: 252771-253406 (Clockwise)

Preceding gene: 88658452

Following gene: 88657709

Centisome position: 21.49

GC content: 30.97

Gene sequence:

>636_bases
TTGTTTATAAGGTCATTGTCTTCTATATTGATTTGTGCTGTTGTATCTTTATCTTTGTATTTTGGAGGAATCGCCTTTTA
TATTTTGTGTTTTTTTCTTGCTATGGTTTCTTCTGTTGAGTTGTTTAATATTATGCAATGTAGAAGATTATATTATATTC
CTGCATTTTTTATGATAGTAATACCTTATGCATCTTTGGTATATATTTATAATTTATTACATGGAGAGATAATCCTGATA
TGGTTGATTTTTGTTATTTGGGGAACAGATGTAGCTGCATATTTTGTTGGTAAAAATATTGGCGAAAAAAAAATAGTTCC
TATGATCAGTCCTAATAAGACATGGGCAGGGTTGTTTGGAGGTATAGTTGCTGGAGCGTTTATTAGTGTTGTTATATCTG
TAATTTTTGGAATATTTTTTGTATTCCATGCATTTATCGCAGGTATTCTTATAGCATTTGTTGCACAAGTTGGTGATATT
ACAGAATCTTATGTAAAACGCTTATGTAAAGTAAAAGATAGTGGGAGCTTTATTCCTGGACATGGGGGTATTCTTGACCG
CATGGATAGTTTTATTTTTACTGCACCGTTGGTTGCTTATTATGTCCAGAAGTTTTCTAAATTTTTTCTAGCATAA

Upstream 100 bases:

>100_bases
TTATACTAAATTGTATTTATGATATAATTGGTTGTTTTTATTAGAGAATATCTTGTATAAGTTTAATAATAATTTGGTTG
AAACAATGGTAAGTGGTAAT

Downstream 100 bases:

>100_bases
TAGCTGCCAGTTTTTTAATTTTTTATTACAATTTTTACGTTTTTTTTTGCATGTATTCTAGTTGTATTAGTTAATACTAT
AGCATATATAAATGTACCCA

Product: putative phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MFIRSLSSILICAVVSLSLYFGGIAFYILCFFLAMVSSVELFNIMQCRRLYYIPAFFMIVIPYASLVYIYNLLHGEIILI
WLIFVIWGTDVAAYFVGKNIGEKKIVPMISPNKTWAGLFGGIVAGAFISVVISVIFGIFFVFHAFIAGILIAFVAQVGDI
TESYVKRLCKVKDSGSFIPGHGGILDRMDSFIFTAPLVAYYVQKFSKFFLA

Sequences:

>Translated_211_residues
MFIRSLSSILICAVVSLSLYFGGIAFYILCFFLAMVSSVELFNIMQCRRLYYIPAFFMIVIPYASLVYIYNLLHGEIILI
WLIFVIWGTDVAAYFVGKNIGEKKIVPMISPNKTWAGLFGGIVAGAFISVVISVIFGIFFVFHAFIAGILIAFVAQVGDI
TESYVKRLCKVKDSGSFIPGHGGILDRMDSFIFTAPLVAYYVQKFSKFFLA
>Mature_211_residues
MFIRSLSSILICAVVSLSLYFGGIAFYILCFFLAMVSSVELFNIMQCRRLYYIPAFFMIVIPYASLVYIYNLLHGEIILI
WLIFVIWGTDVAAYFVGKNIGEKKIVPMISPNKTWAGLFGGIVAGAFISVVISVIFGIFFVFHAFIAGILIAFVAQVGDI
TESYVKRLCKVKDSGSFIPGHGGILDRMDSFIFTAPLVAYYVQKFSKFFLA

Specific function: Unknown

COG id: COG4589

COG function: function code R; Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI1787677, Length=115, Percent_Identity=43.4782608695652, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI87081696, Length=197, Percent_Identity=34.010152284264, Blast_Score=104, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: NA

Molecular weight: Translated: 23568; Mature: 23568

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIRSLSSILICAVVSLSLYFGGIAFYILCFFLAMVSSVELFNIMQCRRLYYIPAFFMIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPYASLVYIYNLLHGEIILIWLIFVIWGTDVAAYFVGKNIGEKKIVPMISPNKTWAGLFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
GIVAGAFISVVISVIFGIFFVFHAFIAGILIAFVAQVGDITESYVKRLCKVKDSGSFIPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
HGGILDRMDSFIFTAPLVAYYVQKFSKFFLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFIRSLSSILICAVVSLSLYFGGIAFYILCFFLAMVSSVELFNIMQCRRLYYIPAFFMIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPYASLVYIYNLLHGEIILIWLIFVIWGTDVAAYFVGKNIGEKKIVPMISPNKTWAGLFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
GIVAGAFISVVISVIFGIFFVFHAFIAGILIAFVAQVGDITESYVKRLCKVKDSGSFIPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
HGGILDRMDSFIFTAPLVAYYVQKFSKFFLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]