| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is secA [H]
Identifier: 88658327
GI number: 88658327
Start: 1169188
End: 1171776
Strand: Direct
Name: secA [H]
Synonym: ECH_1149
Alternate gene names: 88658327
Gene position: 1169188-1171776 (Clockwise)
Preceding gene: 88658531
Following gene: 88658575
Centisome position: 99.4
GC content: 31.71
Gene sequence:
>2589_bases ATGCTCAGTATTGCACACAAGATCTTTGGCTCAACAAACAGCAGGATAATAAAATCATTTCATAAAGTAGTTCAGGATAT AAATGCAATAGAACATGAGATTCAACTTCTTTCTAATGAAGCATTAAAACATAAAACCATAGAATTCAAAGAAGAACTCA AAAATGGAAAAACCTTAGATGATATTCTAGTACCAGCCTTTGCTGTGGTAAGAGAAGCCTCAAAAAGAGTACTAAATATG AGGCACTTTGATGTACAGCTTATAGGTGGAATAGTCCTACATAAAGGAATGATATCCGAAATGAAAACGGGCGAAGGAAA AACTTTAGTAGCAACACTAGCTGCATATTTAAATGCATTAGAAGGAAAAGGAGTTCATATAGTAACAGTAAACGATTATC TAGCAAAACGTGACGCTGAATGGATGGGAGAATTATACAGTGCATTAGGAATAACAGTTGGATGTATACTCACTGAAACA AATGACTTAGAAAGAAAAAACGCTTATAACTGTGACATATTATATTCAACAAACAATAACCTAGGCTTTGACTATTTGCG TGATAACATGAAATTTTCTAGAGATGAAATGGTGCAAAGGGGATTTAATTACGCAATAGTCGATGAGGTCGATTCAATAT TAATAGATGAAGCAAGAACTCCACTAATAATCTCCGGACAAGTCGACCAAGATATCAAAATGTATAAAAAAATAGATAAT CTGATATATGAATTAGCAGAAGAAGATTATGAACTAGAAGAAAAAAACAGAAATATCTTTTTAACTGAAGCCGGAATAAC AAAAATTGAAAATTTATTAATCCAGCATAATCTTATTTCTTCCAATACATCTTTATACGACATAGATAACATCATAATCA TGCACTACATCACTCAAGCATTACGTGCGCATAAAATGTTTGCTGTAGATAAAGATTATATAATTAAAGACGGCAACATA GTAATTATAGATGAATTCACAGGCCGTATGATGGATGGAAGAAGATATTCAGACGGATTGCATCAAGCCCTTGAAGCAAA AGAAAAATTAAATATCAATAGTGAAAACCAAACACTAGCTTCTACTACATTTCAAAATTACTTCAGAATGTACACAAAAC TCTCTGGCATGACAGGCACTGCAGAAACTGAGTCAGAAGAATTCTTAGGAATATATAACTTACAAGTTGTACAAATTCCA ACAAATATACCTGTTCAAAGAATAGACTTAAATGACGATATATATTGTACAGAAGAAGAAAAATTCAATTCCGTCATAAA ATTTATTTCAGAATGTCATAAAAAACTACAGCCTGTACTAGTAGGAACAGTCAGTATCGAAAAATCAGAGATGCTATCTA AACTATTAACAAAAAATAAATTAAAACACTCTGTATTAAATGCACGTTACCATGAACAAGAAGCGTATATAATAGCACAA GCCGGCATACCTGGAACAATCACAATTGCTACAAACATGGCTGGTCGAGGTACAGATATACAGCTTGGAGGAAATTTAAA AATGCTAGCAAAAACAGCACTTGCTAACATTACAGACAAAGAAGCAATAGAAATAAAATACAAACAACTCACAGAAAAAG TAAACAGAGATAAAGAAATAGCAATACAAGCTGGAGGGTTATGTGTAATTGGCACAGAACGTCATGAAAGCAGAAGAATT GACAATCAATTAAGAGGAAGATCTGGTAGACAAGGAGATCCAGGGCTATCCAAATTTTTCTTATCATTAGAAGATGACTT ATTAAGAATATTTGGCTCAGACAAAATAAAAGGAGTTCTTCAAAAGCTAGGCATGAAAAAAGATGAAGCTATTCAACACA CATGGATAAGCAGATCTATTGAAAAAGCACAACACAAGGTTGAGTCAAGAAATTACGATATTAGAAAATCTCTATTAAAG TTTGATAATGTAATCAATGAACAAAGAAAAGTTGTTTTCGACCAAAGAAATAAAATTTTAGATAGTGATTCCTACGATAT TTCAATCATATATAGAGATCTCAATAGTGATATAGTAAATAGTATAATACATGACAAGTACTACAATTTAGACGATGATA CATATAAAGCATTATCATCTGAATTCACAAGAATATACAATATCACCTTGGATTACAGCACTATCAGTAATTTCGAAAGT AAAGACAAAGTTTTAGAACATCTAAACGAAACTGTTGATGAACATTTTGCACAAAAAATAGAAGAATTTACATTAAAAGA TCAAAAAGCATGGGACCATGTAGTAAAAAAAGTCATGATAATGTCATTAGATTACTTATGGAGAGATCACCTTGCTGCAC TAGATAGTTTAAAATGTGGGATAAACTTAAGATCCATAGCACAAAAAGACCCATTAAATGAGTTTAAAGCTGAAGCATTC TCTATGCTTGAGAATATGATGAGCAAGTTTTATGAACTAATAATACAGAGATTATCCCATTTGAAGTTTGATATAGAGTT AAATGATACACAAAGAATAGAATATAATATCCATCATTCCAAAATTTCACGTAATGAAAAGTGCCCATGTGGATCAGGAA AAAAATTCAAACATTGTCATGGTGCTTAA
Upstream 100 bases:
>100_bases AACCCGAAAACATTTACATAGCCTATTGCTAATTTTGTTGTACTTTTATCTTATTTAATCATATAATTCACAACCTAATA AATTAAATGTTAATTTAATT
Downstream 100 bases:
>100_bases TCTTTAGTTGCTTACATATTGTATGATAAACACAATTGTTTCATACCGTTGGTAACTGCAAAACTTTCTATCAAAGGAAT AAACTATATTACAACCCTAA
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 862; Mature: 862
Protein sequence:
>862_residues MLSIAHKIFGSTNSRIIKSFHKVVQDINAIEHEIQLLSNEALKHKTIEFKEELKNGKTLDDILVPAFAVVREASKRVLNM RHFDVQLIGGIVLHKGMISEMKTGEGKTLVATLAAYLNALEGKGVHIVTVNDYLAKRDAEWMGELYSALGITVGCILTET NDLERKNAYNCDILYSTNNNLGFDYLRDNMKFSRDEMVQRGFNYAIVDEVDSILIDEARTPLIISGQVDQDIKMYKKIDN LIYELAEEDYELEEKNRNIFLTEAGITKIENLLIQHNLISSNTSLYDIDNIIIMHYITQALRAHKMFAVDKDYIIKDGNI VIIDEFTGRMMDGRRYSDGLHQALEAKEKLNINSENQTLASTTFQNYFRMYTKLSGMTGTAETESEEFLGIYNLQVVQIP TNIPVQRIDLNDDIYCTEEEKFNSVIKFISECHKKLQPVLVGTVSIEKSEMLSKLLTKNKLKHSVLNARYHEQEAYIIAQ AGIPGTITIATNMAGRGTDIQLGGNLKMLAKTALANITDKEAIEIKYKQLTEKVNRDKEIAIQAGGLCVIGTERHESRRI DNQLRGRSGRQGDPGLSKFFLSLEDDLLRIFGSDKIKGVLQKLGMKKDEAIQHTWISRSIEKAQHKVESRNYDIRKSLLK FDNVINEQRKVVFDQRNKILDSDSYDISIIYRDLNSDIVNSIIHDKYYNLDDDTYKALSSEFTRIYNITLDYSTISNFES KDKVLEHLNETVDEHFAQKIEEFTLKDQKAWDHVVKKVMIMSLDYLWRDHLAALDSLKCGINLRSIAQKDPLNEFKAEAF SMLENMMSKFYELIIQRLSHLKFDIELNDTQRIEYNIHHSKISRNEKCPCGSGKKFKHCHGA
Sequences:
>Translated_862_residues MLSIAHKIFGSTNSRIIKSFHKVVQDINAIEHEIQLLSNEALKHKTIEFKEELKNGKTLDDILVPAFAVVREASKRVLNM RHFDVQLIGGIVLHKGMISEMKTGEGKTLVATLAAYLNALEGKGVHIVTVNDYLAKRDAEWMGELYSALGITVGCILTET NDLERKNAYNCDILYSTNNNLGFDYLRDNMKFSRDEMVQRGFNYAIVDEVDSILIDEARTPLIISGQVDQDIKMYKKIDN LIYELAEEDYELEEKNRNIFLTEAGITKIENLLIQHNLISSNTSLYDIDNIIIMHYITQALRAHKMFAVDKDYIIKDGNI VIIDEFTGRMMDGRRYSDGLHQALEAKEKLNINSENQTLASTTFQNYFRMYTKLSGMTGTAETESEEFLGIYNLQVVQIP TNIPVQRIDLNDDIYCTEEEKFNSVIKFISECHKKLQPVLVGTVSIEKSEMLSKLLTKNKLKHSVLNARYHEQEAYIIAQ AGIPGTITIATNMAGRGTDIQLGGNLKMLAKTALANITDKEAIEIKYKQLTEKVNRDKEIAIQAGGLCVIGTERHESRRI DNQLRGRSGRQGDPGLSKFFLSLEDDLLRIFGSDKIKGVLQKLGMKKDEAIQHTWISRSIEKAQHKVESRNYDIRKSLLK FDNVINEQRKVVFDQRNKILDSDSYDISIIYRDLNSDIVNSIIHDKYYNLDDDTYKALSSEFTRIYNITLDYSTISNFES KDKVLEHLNETVDEHFAQKIEEFTLKDQKAWDHVVKKVMIMSLDYLWRDHLAALDSLKCGINLRSIAQKDPLNEFKAEAF SMLENMMSKFYELIIQRLSHLKFDIELNDTQRIEYNIHHSKISRNEKCPCGSGKKFKHCHGA >Mature_862_residues MLSIAHKIFGSTNSRIIKSFHKVVQDINAIEHEIQLLSNEALKHKTIEFKEELKNGKTLDDILVPAFAVVREASKRVLNM RHFDVQLIGGIVLHKGMISEMKTGEGKTLVATLAAYLNALEGKGVHIVTVNDYLAKRDAEWMGELYSALGITVGCILTET NDLERKNAYNCDILYSTNNNLGFDYLRDNMKFSRDEMVQRGFNYAIVDEVDSILIDEARTPLIISGQVDQDIKMYKKIDN LIYELAEEDYELEEKNRNIFLTEAGITKIENLLIQHNLISSNTSLYDIDNIIIMHYITQALRAHKMFAVDKDYIIKDGNI VIIDEFTGRMMDGRRYSDGLHQALEAKEKLNINSENQTLASTTFQNYFRMYTKLSGMTGTAETESEEFLGIYNLQVVQIP TNIPVQRIDLNDDIYCTEEEKFNSVIKFISECHKKLQPVLVGTVSIEKSEMLSKLLTKNKLKHSVLNARYHEQEAYIIAQ AGIPGTITIATNMAGRGTDIQLGGNLKMLAKTALANITDKEAIEIKYKQLTEKVNRDKEIAIQAGGLCVIGTERHESRRI DNQLRGRSGRQGDPGLSKFFLSLEDDLLRIFGSDKIKGVLQKLGMKKDEAIQHTWISRSIEKAQHKVESRNYDIRKSLLK FDNVINEQRKVVFDQRNKILDSDSYDISIIYRDLNSDIVNSIIHDKYYNLDDDTYKALSSEFTRIYNITLDYSTISNFES KDKVLEHLNETVDEHFAQKIEEFTLKDQKAWDHVVKKVMIMSLDYLWRDHLAALDSLKCGINLRSIAQKDPLNEFKAEAF SMLENMMSKFYELIIQRLSHLKFDIELNDTQRIEYNIHHSKISRNEKCPCGSGKKFKHCHGA
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=915, Percent_Identity=49.2896174863388, Blast_Score=853, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 98805; Mature: 98805
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSIAHKIFGSTNSRIIKSFHKVVQDINAIEHEIQLLSNEALKHKTIEFKEELKNGKTLD CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH DILVPAFAVVREASKRVLNMRHFDVQLIGGIVLHKGMISEMKTGEGKTLVATLAAYLNAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH EGKGVHIVTVNDYLAKRDAEWMGELYSALGITVGCILTETNDLERKNAYNCDILYSTNNN CCCCEEEEEECHHHHHCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEECCCC LGFDYLRDNMKFSRDEMVQRGFNYAIVDEVDSILIDEARTPLIISGQVDQDIKMYKKIDN CCHHHHHHCCCCCHHHHHHCCCCEEEHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHH LIYELAEEDYELEEKNRNIFLTEAGITKIENLLIQHNLISSNTSLYDIDNIIIMHYITQA HHHHHHHCCCCHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH LRAHKMFAVDKDYIIKDGNIVIIDEFTGRMMDGRRYSDGLHQALEAKEKLNINSENQTLA HHHHHHHEECCCEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHH STTFQNYFRMYTKLSGMTGTAETESEEFLGIYNLQVVQIPTNIPVQRIDLNDDIYCTEEE HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCEEECCHH KFNSVIKFISECHKKLQPVLVGTVSIEKSEMLSKLLTKNKLKHSVLNARYHEQEAYIIAQ HHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE AGIPGTITIATNMAGRGTDIQLGGNLKMLAKTALANITDKEAIEIKYKQLTEKVNRDKEI CCCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEE AIQAGGLCVIGTERHESRRIDNQLRGRSGRQGDPGLSKFFLSLEDDLLRIFGSDKIKGVL EEEECCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH QKLGMKKDEAIQHTWISRSIEKAQHKVESRNYDIRKSLLKFDNVINEQRKVVFDQRNKIL HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC DSDSYDISIIYRDLNSDIVNSIIHDKYYNLDDDTYKALSSEFTRIYNITLDYSTISNFES CCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEEEHHHHHCCCH KDKVLEHLNETVDEHFAQKIEEFTLKDQKAWDHVVKKVMIMSLDYLWRDHLAALDSLKCG HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC INLRSIAQKDPLNEFKAEAFSMLENMMSKFYELIIQRLSHLKFDIELNDTQRIEYNIHHS CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEEEEEHH KISRNEKCPCGSGKKFKHCHGA HHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLSIAHKIFGSTNSRIIKSFHKVVQDINAIEHEIQLLSNEALKHKTIEFKEELKNGKTLD CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH DILVPAFAVVREASKRVLNMRHFDVQLIGGIVLHKGMISEMKTGEGKTLVATLAAYLNAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH EGKGVHIVTVNDYLAKRDAEWMGELYSALGITVGCILTETNDLERKNAYNCDILYSTNNN CCCCEEEEEECHHHHHCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEECCCC LGFDYLRDNMKFSRDEMVQRGFNYAIVDEVDSILIDEARTPLIISGQVDQDIKMYKKIDN CCHHHHHHCCCCCHHHHHHCCCCEEEHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHH LIYELAEEDYELEEKNRNIFLTEAGITKIENLLIQHNLISSNTSLYDIDNIIIMHYITQA HHHHHHHCCCCHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH LRAHKMFAVDKDYIIKDGNIVIIDEFTGRMMDGRRYSDGLHQALEAKEKLNINSENQTLA HHHHHHHEECCCEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHH STTFQNYFRMYTKLSGMTGTAETESEEFLGIYNLQVVQIPTNIPVQRIDLNDDIYCTEEE HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCEEECCHH KFNSVIKFISECHKKLQPVLVGTVSIEKSEMLSKLLTKNKLKHSVLNARYHEQEAYIIAQ HHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE AGIPGTITIATNMAGRGTDIQLGGNLKMLAKTALANITDKEAIEIKYKQLTEKVNRDKEI CCCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEE AIQAGGLCVIGTERHESRRIDNQLRGRSGRQGDPGLSKFFLSLEDDLLRIFGSDKIKGVL EEEECCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH QKLGMKKDEAIQHTWISRSIEKAQHKVESRNYDIRKSLLKFDNVINEQRKVVFDQRNKIL HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC DSDSYDISIIYRDLNSDIVNSIIHDKYYNLDDDTYKALSSEFTRIYNITLDYSTISNFES CCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEEEHHHHHCCCH KDKVLEHLNETVDEHFAQKIEEFTLKDQKAWDHVVKKVMIMSLDYLWRDHLAALDSLKCG HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC INLRSIAQKDPLNEFKAEAFSMLENMMSKFYELIIQRLSHLKFDIELNDTQRIEYNIHHS CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEEEEEHH KISRNEKCPCGSGKKFKHCHGA HHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA