| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
Click here to switch to the map view.
The map label for this gene is 88658531
Identifier: 88658531
GI number: 88658531
Start: 1168354
End: 1168782
Strand: Direct
Name: 88658531
Synonym: ECH_1148
Alternate gene names: NA
Gene position: 1168354-1168782 (Clockwise)
Preceding gene: 88658501
Following gene: 88658327
Centisome position: 99.33
GC content: 37.06
Gene sequence:
>429_bases ATGGATATTTTTGGCAATGAATTCGATGTTCACGTTAACGCAAACGGAACAGAGTACGCAGGAAAAATGAGTATAGACAG CAATGGTGATTTCGATGTCAATCTCGACTTACAAGATGGTGTGGGAACTTTAGGCCATCTCTCTGGACACATATCTCAAA GTGACGATGCTGCTAATTATATTATTGAGTATATATTTGACCAATGTATAATTTATCCAGAATTACCTGTTTTACATTCA TTTAATGGACAAATAGTATCTCCTGCTGAAGAAGGTAGCATTATTTTTGACAATGGTGATAACATTCAAATTTCATTACA TGGCTTACAAGAGCAACCAGAAGAAGCTATACCTGCTGCAGAAGTAGAAGAAGCTGTACCAGCAGAAGCAGCTATACCTG CTGCGGAAGTAACAGAAAATCAACAATAA
Upstream 100 bases:
>100_bases AGGATCTTTGGTAATTTATTTTTTTTATCAAACAAAATATATTGTTTTATTATATTAACAAGATATAATAACACTATTAA TAAAATTTAGGTAAGCTATA
Downstream 100 bases:
>100_bases TACTTTTCGTAGGTATCTTTGTTTTTTATTAAAAATTAGTTAATAAATAAATACTTGTAAGGTGGATGCTTGGTTTTTGC AAGTATTCACATTATAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MDIFGNEFDVHVNANGTEYAGKMSIDSNGDFDVNLDLQDGVGTLGHLSGHISQSDDAANYIIEYIFDQCIIYPELPVLHS FNGQIVSPAEEGSIIFDNGDNIQISLHGLQEQPEEAIPAAEVEEAVPAEAAIPAAEVTENQQ
Sequences:
>Translated_142_residues MDIFGNEFDVHVNANGTEYAGKMSIDSNGDFDVNLDLQDGVGTLGHLSGHISQSDDAANYIIEYIFDQCIIYPELPVLHS FNGQIVSPAEEGSIIFDNGDNIQISLHGLQEQPEEAIPAAEVEEAVPAEAAIPAAEVTENQQ >Mature_142_residues MDIFGNEFDVHVNANGTEYAGKMSIDSNGDFDVNLDLQDGVGTLGHLSGHISQSDDAANYIIEYIFDQCIIYPELPVLHS FNGQIVSPAEEGSIIFDNGDNIQISLHGLQEQPEEAIPAAEVEEAVPAEAAIPAAEVTENQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15287; Mature: 15287
Theoretical pI: Translated: 3.51; Mature: 3.51
Prosite motif: PS00761 SPASE_I_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIFGNEFDVHVNANGTEYAGKMSIDSNGDFDVNLDLQDGVGTLGHLSGHISQSDDAANY CCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHCCCCCCCCCCHHHH IIEYIFDQCIIYPELPVLHSFNGQIVSPAEEGSIIFDNGDNIQISLHGLQEQPEEAIPAA HHHHHHHHHEECCCCCEEECCCCCEECCCCCCCEEEECCCEEEEEEECCCCCCCCCCCHH EVEEAVPAEAAIPAAEVTENQQ HHHHHCCCCCCCCHHHHCCCCC >Mature Secondary Structure MDIFGNEFDVHVNANGTEYAGKMSIDSNGDFDVNLDLQDGVGTLGHLSGHISQSDDAANY CCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHCCCCCCCCCCHHHH IIEYIFDQCIIYPELPVLHSFNGQIVSPAEEGSIIFDNGDNIQISLHGLQEQPEEAIPAA HHHHHHHHHEECCCCCEEECCCCCEECCCCCCCEEEECCCEEEEEEECCCCCCCCCCCHH EVEEAVPAEAAIPAAEVTENQQ HHHHHCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA