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The map label for this gene is recR [H]

Identifier: 88658065

GI number: 88658065

Start: 861489

End: 862076

Strand: Reverse

Name: recR [H]

Synonym: ECH_0843

Alternate gene names: 88658065

Gene position: 862076-861489 (Counterclockwise)

Preceding gene: 88658420

Following gene: 88658222

Centisome position: 73.29

GC content: 32.99

Gene sequence:

>588_bases
GTGGATATTAATAAGTTAATTGCTATGTTTGCAAAACTTCCTAGTTTTGGGCCATCTTCTTCTAGAAGAATTGTACTTCA
TTTACTTCGTAACAAAGAAGAAATTATGTTGCCTTTAGCATCAGGAATTCAGGATTTAGCGTTTCAGGCTAAGGAGTGTC
CTGTATGTTTTAATATAGATGTTAAGTCACCATGTAGCATTTGTTCTGATACTAAACGTGATCATCAGTTGTTATGTATA
GTAGAAGAACTAGGAGATTTATGGGCATTTGAAAAAGGAAAAATATATCAAGGTGTGTACCATGTATTAGGAGGGACTTT
GTCTGCAATTTATGGGATAGGACCTGATCAATTGAATTTGGATAGTATTGTAGAAAGAATAAAAAAATTTAATGTACAAG
AAGTGATTATAGGGATAGGAAATACTATGGATGGACAGGTTACTACTCATTATATAACTCAAATGGTTAAGGAACTAGGG
ATTAAGGTAACTAGATTAGCTTGTGGTATACCTATGGGAGGAGAAATAGATTATTTAGACGAAGGGACTTTAAGTGCAGC
TTTATCATCTCGATATATTATATCTTAA

Upstream 100 bases:

>100_bases
CATTGTAGGTTTTTTTGAGTTAGATAGTTGATTGTAAATACCATATGGGCATTTTGTGTTATATGATGTTGTTTAGCTTA
TCAATTGTTAAGGAGGTGGT

Downstream 100 bases:

>100_bases
TAATTTATTATATTATGTAATAAGATACTTATGGACTTTTTAGTCATCACTGGAAGTGTTTTATATAACTGATATTTATT
TCTGGTAGATAATTGAAGGA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MDINKLIAMFAKLPSFGPSSSRRIVLHLLRNKEEIMLPLASGIQDLAFQAKECPVCFNIDVKSPCSICSDTKRDHQLLCI
VEELGDLWAFEKGKIYQGVYHVLGGTLSAIYGIGPDQLNLDSIVERIKKFNVQEVIIGIGNTMDGQVTTHYITQMVKELG
IKVTRLACGIPMGGEIDYLDEGTLSAALSSRYIIS

Sequences:

>Translated_195_residues
MDINKLIAMFAKLPSFGPSSSRRIVLHLLRNKEEIMLPLASGIQDLAFQAKECPVCFNIDVKSPCSICSDTKRDHQLLCI
VEELGDLWAFEKGKIYQGVYHVLGGTLSAIYGIGPDQLNLDSIVERIKKFNVQEVIIGIGNTMDGQVTTHYITQMVKELG
IKVTRLACGIPMGGEIDYLDEGTLSAALSSRYIIS
>Mature_195_residues
MDINKLIAMFAKLPSFGPSSSRRIVLHLLRNKEEIMLPLASGIQDLAFQAKECPVCFNIDVKSPCSICSDTKRDHQLLCI
VEELGDLWAFEKGKIYQGVYHVLGGTLSAIYGIGPDQLNLDSIVERIKKFNVQEVIIGIGNTMDGQVTTHYITQMVKELG
IKVTRLACGIPMGGEIDYLDEGTLSAALSSRYIIS

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recR family [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=193, Percent_Identity=31.6062176165803, Blast_Score=123, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 21492; Mature: 21492

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINKLIAMFAKLPSFGPSSSRRIVLHLLRNKEEIMLPLASGIQDLAFQAKECPVCFNID
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHCCCEEEECC
VKSPCSICSDTKRDHQLLCIVEELGDLWAFEKGKIYQGVYHVLGGTLSAIYGIGPDQLNL
CCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCH
DSIVERIKKFNVQEVIIGIGNTMDGQVTTHYITQMVKELGIKVTRLACGIPMGGEIDYLD
HHHHHHHHHCCHHHEEEECCCCCCCCHHHHHHHHHHHHHCCEEEHHHCCCCCCCCCCCCC
EGTLSAALSSRYIIS
CCHHHHHHCCCCCCC
>Mature Secondary Structure
MDINKLIAMFAKLPSFGPSSSRRIVLHLLRNKEEIMLPLASGIQDLAFQAKECPVCFNID
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHCCCEEEECC
VKSPCSICSDTKRDHQLLCIVEELGDLWAFEKGKIYQGVYHVLGGTLSAIYGIGPDQLNL
CCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCH
DSIVERIKKFNVQEVIIGIGNTMDGQVTTHYITQMVKELGIKVTRLACGIPMGGEIDYLD
HHHHHHHHHCCHHHEEEECCCCCCCCHHHHHHHHHHHHHCCEEEHHHCCCCCCCCCCCCC
EGTLSAALSSRYIIS
CCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA