| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658062
Identifier: 88658062
GI number: 88658062
Start: 461235
End: 462209
Strand: Direct
Name: 88658062
Synonym: ECH_0482
Alternate gene names: NA
Gene position: 461235-462209 (Clockwise)
Preceding gene: 88657586
Following gene: 88658546
Centisome position: 39.21
GC content: 29.33
Gene sequence:
>975_bases ATGAAATTTATATGTAGAATGAAGTATGCTATAATTATAGTTTTATTTTTTATTATCTTATTTATTCCGTGTACATCAGT ATCAGTGGGATGTGTAAGATATGATCAGAAGGATATTGTAGTTGGATTGATATCTACTGAGTTTATTAGTTACCCTAATG AGTATAAAACGGCTTTGGGAATTACACAATTACTTCAGAGTTATGGTGTTCGTGTAGTTCTTATGGATTATAATGTAATT ATGCAGTTAGTGAAAGATGAAATAGTAAAGATTAATAAAACCTATAAAGCAAATTGTAAGATATCAAGATACGATATTAT AGAAAGTGTGGTTCTAAAGTTTATAGAAGAGCATAATATCAATAGAATATTTATACCAGGAAACCACTATAATATTAGTT CTTTACCAATTGCTCCGTCTTTAGATAGACAATTGGTTACTAATGCTGTCGTTAAAATAATTCATAATCAAAATCATTGT ATACATCTTCTTGGTGTTTGTGGTGGTTTACAAGGTATAATGTATGCAAATGGAATTAAAATCACAAGGGTGAAGGATAT AGTTAATTCTGATATTTCTGTGAAATCACATACTGTGTCAATGCCTGATCCTAGAAGTGTGTATGCTAATTTACATAAAA TCAAAATTTTTCCTAACACTAGGTTATCAAATATTGCAGTTGATTTGAAATTGGCTAAAGATCAAATTATATATTTTCCA GATGCACATTCAGAAGCAATTGATAGCAATGTAGAGAATGTGATGAAAATGTATAATTTGGGATATAAAATTGCTGCTAT GTCGGAGGATGGTGTTATAGAGGCGATAGAGGATAAATATGGTAATATATATTTTCAATTTCATCCAGAGTACTTAATGA TTAATGCCGAAAGAAAATTTGGGGACAATACAAGTAGAGATACATCAATTATGCTTGCGGATGCAATAATTAAAGATTTT CTTTTTCGTGATTGA
Upstream 100 bases:
>100_bases ATTAATTTAGTAGTAGCTTTAACACTTATATTAAGTATATCATTAATTTATTAATAATTATTTGTCAATAATTTATACTA TGTTATAAAAAGATTATTGT
Downstream 100 bases:
>100_bases AGAGATTTAGAGATAAACAAATTTATATTAACGAGTGCGTATTTTGAGTAAATATGTTTACTTATCTAGTATGATGTGAT TTTTGACTTTGGTATAAGTA
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKFICRMKYAIIIVLFFIILFIPCTSVSVGCVRYDQKDIVVGLISTEFISYPNEYKTALGITQLLQSYGVRVVLMDYNVI MQLVKDEIVKINKTYKANCKISRYDIIESVVLKFIEEHNINRIFIPGNHYNISSLPIAPSLDRQLVTNAVVKIIHNQNHC IHLLGVCGGLQGIMYANGIKITRVKDIVNSDISVKSHTVSMPDPRSVYANLHKIKIFPNTRLSNIAVDLKLAKDQIIYFP DAHSEAIDSNVENVMKMYNLGYKIAAMSEDGVIEAIEDKYGNIYFQFHPEYLMINAERKFGDNTSRDTSIMLADAIIKDF LFRD
Sequences:
>Translated_324_residues MKFICRMKYAIIIVLFFIILFIPCTSVSVGCVRYDQKDIVVGLISTEFISYPNEYKTALGITQLLQSYGVRVVLMDYNVI MQLVKDEIVKINKTYKANCKISRYDIIESVVLKFIEEHNINRIFIPGNHYNISSLPIAPSLDRQLVTNAVVKIIHNQNHC IHLLGVCGGLQGIMYANGIKITRVKDIVNSDISVKSHTVSMPDPRSVYANLHKIKIFPNTRLSNIAVDLKLAKDQIIYFP DAHSEAIDSNVENVMKMYNLGYKIAAMSEDGVIEAIEDKYGNIYFQFHPEYLMINAERKFGDNTSRDTSIMLADAIIKDF LFRD >Mature_324_residues MKFICRMKYAIIIVLFFIILFIPCTSVSVGCVRYDQKDIVVGLISTEFISYPNEYKTALGITQLLQSYGVRVVLMDYNVI MQLVKDEIVKINKTYKANCKISRYDIIESVVLKFIEEHNINRIFIPGNHYNISSLPIAPSLDRQLVTNAVVKIIHNQNHC IHLLGVCGGLQGIMYANGIKITRVKDIVNSDISVKSHTVSMPDPRSVYANLHKIKIFPNTRLSNIAVDLKLAKDQIIYFP DAHSEAIDSNVENVMKMYNLGYKIAAMSEDGVIEAIEDKYGNIYFQFHPEYLMINAERKFGDNTSRDTSIMLADAIIKDF LFRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36906; Mature: 36906
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFICRMKYAIIIVLFFIILFIPCTSVSVGCVRYDQKDIVVGLISTEFISYPNEYKTALG CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEHHHHHCCCCHHHHHHH ITQLLQSYGVRVVLMDYNVIMQLVKDEIVKINKTYKANCKISRYDIIESVVLKFIEEHNI HHHHHHHCCCEEEEECHHHHHHHHHHHHEEECCCEECCCEEEHHHHHHHHHHHHHHHCCC NRIFIPGNHYNISSLPIAPSLDRQLVTNAVVKIIHNQNHCIHLLGVCGGLQGIMYANGIK CEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHCCHHHHEEECCEE ITRVKDIVNSDISVKSHTVSMPDPRSVYANLHKIKIFPNTRLSNIAVDLKLAKDQIIYFP EEEEHHHHCCCCEEEEEEECCCCCHHHHCCEEEEEEECCCCCCEEEEEEEEECCEEEECC DAHSEAIDSNVENVMKMYNLGYKIAAMSEDGVIEAIEDKYGNIYFQFHPEYLMINAERKF CCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEHHCCCCCEEEEECCCEEEEECCHHC GDNTSRDTSIMLADAIIKDFLFRD CCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKFICRMKYAIIIVLFFIILFIPCTSVSVGCVRYDQKDIVVGLISTEFISYPNEYKTALG CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEHHHHHCCCCHHHHHHH ITQLLQSYGVRVVLMDYNVIMQLVKDEIVKINKTYKANCKISRYDIIESVVLKFIEEHNI HHHHHHHCCCEEEEECHHHHHHHHHHHHEEECCCEECCCEEEHHHHHHHHHHHHHHHCCC NRIFIPGNHYNISSLPIAPSLDRQLVTNAVVKIIHNQNHCIHLLGVCGGLQGIMYANGIK CEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHCCHHHHEEECCEE ITRVKDIVNSDISVKSHTVSMPDPRSVYANLHKIKIFPNTRLSNIAVDLKLAKDQIIYFP EEEEHHHHCCCCEEEEEEECCCCCHHHHCCEEEEEEECCCCCCEEEEEEEEECCEEEECC DAHSEAIDSNVENVMKMYNLGYKIAAMSEDGVIEAIEDKYGNIYFQFHPEYLMINAERKF CCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEHHCCCCCEEEEECCCEEEEECCHHC GDNTSRDTSIMLADAIIKDFLFRD CCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA