| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658059
Identifier: 88658059
GI number: 88658059
Start: 107054
End: 108160
Strand: Direct
Name: 88658059
Synonym: ECH_0121
Alternate gene names: NA
Gene position: 107054-108160 (Clockwise)
Preceding gene: 88657633
Following gene: 88658530
Centisome position: 9.1
GC content: 33.69
Gene sequence:
>1107_bases ATGCAACATACTGCAGTACCTGGAATGGTAGCTCCAACAAGCGTTATTTCTGCTAAGCATGTTGTAATTAAAGGACTTGT TTACAAGCATGTGAAGCATTATTCGATAGAGGAATATAAATCTCAAATAAAAGAGTTTAGGGAATCTATAACGTGTTTTG CAAGAATGCATATGTCCTATATGTATCATATGCTGCATAATACGTTCGTTGTAAGGAATGGAAGGATTATGTTGAAGTCT GAAATTGAACAGTGTCTATCAAAAATAACCAGTAATATAAGGCTGTGTGCCTTTGTGATTAAGATAGGAATAGTAGACCA CGTTATGAGTAGGCTTTGCAGGTTTTATGGTTCTGACAGCATAAAGTATTGTGCAAGTCATTACCATGATCCAAGGGTTA TAGATTCGATACTTATTGGGTTATATGGTGCGTCATATTCTGATTTTTCAAGGATGTCATATCAAGTACGTAGTAATATA GTTTATTGTGTTGGAAAACATGGTATTGCAGGTGTTTTTAAGCTACATAATAGTGGTTTTTACTCAGAATTATTAGGTAT GTGTTATGATTTTGTTCATGCAAGGGGTAAGGGTGTAAAATTGCAAGAATTATGTGATTTTATGAAGTTGTCTTGTAGTA TACAACTTGGGCAAATGTATCACATGATGGTAAAAGTCAAATGTTCTATTGGAGATGAGCAAAGTGATATACGGAAACTT GTATCCCAAGAATGTAGTGTAGGGTATCTAGTATATCGTTCTTTACTTTTTGGTAGGTATGCTTATCATGTAAGAAAAGC GTTTAGGCATTTATATGCTCCAAGTGATAAAAACCCTGTACGTACAGTATCTGGGTTAAACATTCCGCATAGTCTAATTC GACTAAATCATAGAGGAATTTTTACAAAAATTGAACATTGTATAAACGCAGAAAAAATGAGTTTTAATGTTTTTGTTGTT GATATAGTGCGTCATATTGACAAGCTATTATTGCATCCGCGTGAAGAAGTTTATATAAGAGAAGATATAAGTACATATTG CGCTATAGTGAGTAGTAGATATAGTACTATGGGGCCTGACATAGATTCTTCTTATCATATATTGTAG
Upstream 100 bases:
>100_bases ATCTTCTGTTAAAGAGGGTGTAGAAAAAGCATGCACTGGCCAGAAAATTGAAGAAGCCTCTGGGTTAAAAGATGAAGTTG ATAAAACATTAAGTGCTAGT
Downstream 100 bases:
>100_bases ATTTGAATGTTATCTTAAATTATGTTTTAGGTATTGTGTTGTATTGTCAATGTTCTATAAAGTACGTTTAATCAATGGTT GCTGGTAACGTAATCTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MQHTAVPGMVAPTSVISAKHVVIKGLVYKHVKHYSIEEYKSQIKEFRESITCFARMHMSYMYHMLHNTFVVRNGRIMLKS EIEQCLSKITSNIRLCAFVIKIGIVDHVMSRLCRFYGSDSIKYCASHYHDPRVIDSILIGLYGASYSDFSRMSYQVRSNI VYCVGKHGIAGVFKLHNSGFYSELLGMCYDFVHARGKGVKLQELCDFMKLSCSIQLGQMYHMMVKVKCSIGDEQSDIRKL VSQECSVGYLVYRSLLFGRYAYHVRKAFRHLYAPSDKNPVRTVSGLNIPHSLIRLNHRGIFTKIEHCINAEKMSFNVFVV DIVRHIDKLLLHPREEVYIREDISTYCAIVSSRYSTMGPDIDSSYHIL
Sequences:
>Translated_368_residues MQHTAVPGMVAPTSVISAKHVVIKGLVYKHVKHYSIEEYKSQIKEFRESITCFARMHMSYMYHMLHNTFVVRNGRIMLKS EIEQCLSKITSNIRLCAFVIKIGIVDHVMSRLCRFYGSDSIKYCASHYHDPRVIDSILIGLYGASYSDFSRMSYQVRSNI VYCVGKHGIAGVFKLHNSGFYSELLGMCYDFVHARGKGVKLQELCDFMKLSCSIQLGQMYHMMVKVKCSIGDEQSDIRKL VSQECSVGYLVYRSLLFGRYAYHVRKAFRHLYAPSDKNPVRTVSGLNIPHSLIRLNHRGIFTKIEHCINAEKMSFNVFVV DIVRHIDKLLLHPREEVYIREDISTYCAIVSSRYSTMGPDIDSSYHIL >Mature_368_residues MQHTAVPGMVAPTSVISAKHVVIKGLVYKHVKHYSIEEYKSQIKEFRESITCFARMHMSYMYHMLHNTFVVRNGRIMLKS EIEQCLSKITSNIRLCAFVIKIGIVDHVMSRLCRFYGSDSIKYCASHYHDPRVIDSILIGLYGASYSDFSRMSYQVRSNI VYCVGKHGIAGVFKLHNSGFYSELLGMCYDFVHARGKGVKLQELCDFMKLSCSIQLGQMYHMMVKVKCSIGDEQSDIRKL VSQECSVGYLVYRSLLFGRYAYHVRKAFRHLYAPSDKNPVRTVSGLNIPHSLIRLNHRGIFTKIEHCINAEKMSFNVFVV DIVRHIDKLLLHPREEVYIREDISTYCAIVSSRYSTMGPDIDSSYHIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42347; Mature: 42347
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHTAVPGMVAPTSVISAKHVVIKGLVYKHVKHYSIEEYKSQIKEFRESITCFARMHMSY CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH MYHMLHNTFVVRNGRIMLKSEIEQCLSKITSNIRLCAFVIKIGIVDHVMSRLCRFYGSDS HHHHHHHHEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH IKYCASHYHDPRVIDSILIGLYGASYSDFSRMSYQVRSNIVYCVGKHGIAGVFKLHNSGF HHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEECCCCCEEEEEECCCCH YSELLGMCYDFVHARGKGVKLQELCDFMKLSCSIQLGQMYHMMVKVKCSIGDEQSDIRKL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHH VSQECSVGYLVYRSLLFGRYAYHVRKAFRHLYAPSDKNPVRTVSGLNIPHSLIRLNHRGI HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCHH FTKIEHCINAEKMSFNVFVVDIVRHIDKLLLHPREEVYIREDISTYCAIVSSRYSTMGPD HHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHCCCC IDSSYHIL CCCCCCCC >Mature Secondary Structure MQHTAVPGMVAPTSVISAKHVVIKGLVYKHVKHYSIEEYKSQIKEFRESITCFARMHMSY CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH MYHMLHNTFVVRNGRIMLKSEIEQCLSKITSNIRLCAFVIKIGIVDHVMSRLCRFYGSDS HHHHHHHHEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH IKYCASHYHDPRVIDSILIGLYGASYSDFSRMSYQVRSNIVYCVGKHGIAGVFKLHNSGF HHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEECCCCCEEEEEECCCCH YSELLGMCYDFVHARGKGVKLQELCDFMKLSCSIQLGQMYHMMVKVKCSIGDEQSDIRKL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHH VSQECSVGYLVYRSLLFGRYAYHVRKAFRHLYAPSDKNPVRTVSGLNIPHSLIRLNHRGI HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCHH FTKIEHCINAEKMSFNVFVVDIVRHIDKLLLHPREEVYIREDISTYCAIVSSRYSTMGPD HHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHCCCC IDSSYHIL CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA