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The map label for this gene is 88657852

Identifier: 88657852

GI number: 88657852

Start: 1142894

End: 1143535

Strand: Direct

Name: 88657852

Synonym: ECH_1118

Alternate gene names: NA

Gene position: 1142894-1143535 (Clockwise)

Preceding gene: 88657671

Following gene: 88658200

Centisome position: 97.16

GC content: 31.46

Gene sequence:

>642_bases
ATGTCTACACATGCGAAAAACAAAATAAATAAAATGGAAGATACTGATGAAATAAAAGCACATGATCCTTTAATTGCCGG
TTTGATCGATAAAAACATGCAGAAAAACAAATTTACAAATAAAGGAGTAAACGACAATCATACTTCCAAAAATTTCACAA
AAGAAGGAGTAGAATCCACAAAAGATCTAAAAAATAGCACAACAAAAATTAGGCCTCACCCTGTTGATGAGTGCGTTGGG
AAAGAAATAAAAAGACAACGTATCATGAGAGGTATGAGTCAAAACCAGCTTGCAAACAAATTAGGAATCACTTTCCAACA
AGTACAAAAGTATGAAAAAGGAACAAACCGTATAGTGATTAGCAGGCTATATCAACTTGCAAGCGTACTTAACGTTGAAG
TAAGAGATATAATGTTAAAGTTACAGGAAGATCTAAAAAATATTTCATGTGATCACACTGTTGCATCTACATCTACTCTT
AAAGATAACGAGGAAAAGTTTATACCAGAGTTTCACGATAGCAAAATAGATAGCAAAGAAGTTTTAATGATGGTTAGAGC
ATATACTTGTATAAAAAATGAAAAAGTACGTAACATAATTTACAATTTGGTTAAGGCATTGTCTTTAGATAACAAACAGT
AA

Upstream 100 bases:

>100_bases
TATTCCAGCAAACTAGATAGAATATATCCATTAAATAACTATTGCATTCACTTTATGCATGATTTATCTTACATAGGTTG
CTTTGTTATAGGAAAATAAT

Downstream 100 bases:

>100_bases
GTTATAAAATTGTATCTTATATATACAAGTATGCTAATAAATTAAAGCTTTCATAATTGTAATGCATTAACAATGATTTA
TTTTATAATATTAACCTATA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MSTHAKNKINKMEDTDEIKAHDPLIAGLIDKNMQKNKFTNKGVNDNHTSKNFTKEGVESTKDLKNSTTKIRPHPVDECVG
KEIKRQRIMRGMSQNQLANKLGITFQQVQKYEKGTNRIVISRLYQLASVLNVEVRDIMLKLQEDLKNISCDHTVASTSTL
KDNEEKFIPEFHDSKIDSKEVLMMVRAYTCIKNEKVRNIIYNLVKALSLDNKQ

Sequences:

>Translated_213_residues
MSTHAKNKINKMEDTDEIKAHDPLIAGLIDKNMQKNKFTNKGVNDNHTSKNFTKEGVESTKDLKNSTTKIRPHPVDECVG
KEIKRQRIMRGMSQNQLANKLGITFQQVQKYEKGTNRIVISRLYQLASVLNVEVRDIMLKLQEDLKNISCDHTVASTSTL
KDNEEKFIPEFHDSKIDSKEVLMMVRAYTCIKNEKVRNIIYNLVKALSLDNKQ
>Mature_212_residues
STHAKNKINKMEDTDEIKAHDPLIAGLIDKNMQKNKFTNKGVNDNHTSKNFTKEGVESTKDLKNSTTKIRPHPVDECVGK
EIKRQRIMRGMSQNQLANKLGITFQQVQKYEKGTNRIVISRLYQLASVLNVEVRDIMLKLQEDLKNISCDHTVASTSTLK
DNEEKFIPEFHDSKIDSKEVLMMVRAYTCIKNEKVRNIIYNLVKALSLDNKQ

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 24478; Mature: 24346

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTHAKNKINKMEDTDEIKAHDPLIAGLIDKNMQKNKFTNKGVNDNHTSKNFTKEGVEST
CCCCHHHHHHHCCCHHHHHHCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHH
KDLKNSTTKIRPHPVDECVGKEIKRQRIMRGMSQNQLANKLGITFQQVQKYEKGTNRIVI
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCHHHH
SRLYQLASVLNVEVRDIMLKLQEDLKNISCDHTVASTSTLKDNEEKFIPEFHDSKIDSKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHCCCCHHHHCCCCCCCCCCHHH
VLMMVRAYTCIKNEKVRNIIYNLVKALSLDNKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
STHAKNKINKMEDTDEIKAHDPLIAGLIDKNMQKNKFTNKGVNDNHTSKNFTKEGVEST
CCCHHHHHHHCCCHHHHHHCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHH
KDLKNSTTKIRPHPVDECVGKEIKRQRIMRGMSQNQLANKLGITFQQVQKYEKGTNRIVI
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCHHHH
SRLYQLASVLNVEVRDIMLKLQEDLKNISCDHTVASTSTLKDNEEKFIPEFHDSKIDSKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHCCCCHHHHCCCCCCCCCCHHH
VLMMVRAYTCIKNEKVRNIIYNLVKALSLDNKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]