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The map label for this gene is 88657802

Identifier: 88657802

GI number: 88657802

Start: 456142

End: 456969

Strand: Direct

Name: 88657802

Synonym: ECH_0477

Alternate gene names: NA

Gene position: 456142-456969 (Clockwise)

Preceding gene: 88658308

Following gene: 88658231

Centisome position: 38.78

GC content: 31.76

Gene sequence:

>828_bases
ATGTTGAATAGTTTATTGGTTTTTGATATAGAAACAATTCCAGATGTGGATGTTTGCCGTAATCTCCTCAGTGATTTTGA
TGAGACAGTTGAGTTGAGTGAGAAAAGGGAAGCATTAATAAATTACCATTTAGATATTACTGATGGTAAAAATCCATTTT
TAAGGCAACCTTTTCATAAGGTGGTTGCAATTAGTTTTCTTAAAGCAGATATTAAAAAGATGGGAGAATATGAATCTTTC
CATTTGCAAGAAATACGTTCTGGTGGAAAAATAGATTCTGTCGAAAAAGATTTGCTTAAGGGATTTTTTCAATATGTTTC
ATCTTTGAGGCCAAGATTTGTGTCTTTTAATGGACGTACTTTTGATTTTCCAGTGTTAAAATATAGAGCTATGGTACATG
GTATACAAGCAGGGTGTTTGTATAAAATTGGGGATAAGTGGAATAATTATTTTCAACGCTATAGCATCGACTGGCATTGT
GACTTATTAGATTATCTTTCTGATTTTGGTACTTCTGCTAGAATAAAGATGAATGAAGTGTGTTCAGTGTTAAATTTTCC
TGGTAAATTTGGTCTTGATGGGTCAAAGGTTACTGCACTATATGATAGTGGTAAAATATCTGAAATTCGAGATTACTGTG
AGACAGATGTAATAAATACCTATTTGGTGTATTTGAGAATGATGCATTATCAGGATAGGATTACAACACTAAGCTATAAT
GATAGTATAAATGACTTATTGTCGTATTTAGATTCCAGTGGAAGAGAACATTTCAAACAATTTAGAATTGAGTGGGATAA
ATCTTGTGGTGGAAATTTTTATCTTTAA

Upstream 100 bases:

>100_bases
AGATCTGATCTTGCAAAGATCCTTGATTTAAAGATACATCTTTTCTTATTTGTAAAAGTTAGAGAATTTTGGCAAAACCA
TTTAGATGAATGTGTAGGGT

Downstream 100 bases:

>100_bases
TCATATATAATATATTCAATTAATTAATTTATATATTTGCTAGTATATCATTATTGTATTAGTAAGTTTTTTGGAATCCA
TTATGCGGAATGTAAAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: 3-5' Exonuclease PolB-Like Protein; Polysaccharide Biosynthesis Protein; Propable PolB; Polysaccharide Biosynthesis Protein WlaX; Lipoprotein SmpA/OmlA Family; 3&Apos; Large-Conductance Mechanosensitive Channel

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MLNSLLVFDIETIPDVDVCRNLLSDFDETVELSEKREALINYHLDITDGKNPFLRQPFHKVVAISFLKADIKKMGEYESF
HLQEIRSGGKIDSVEKDLLKGFFQYVSSLRPRFVSFNGRTFDFPVLKYRAMVHGIQAGCLYKIGDKWNNYFQRYSIDWHC
DLLDYLSDFGTSARIKMNEVCSVLNFPGKFGLDGSKVTALYDSGKISEIRDYCETDVINTYLVYLRMMHYQDRITTLSYN
DSINDLLSYLDSSGREHFKQFRIEWDKSCGGNFYL

Sequences:

>Translated_275_residues
MLNSLLVFDIETIPDVDVCRNLLSDFDETVELSEKREALINYHLDITDGKNPFLRQPFHKVVAISFLKADIKKMGEYESF
HLQEIRSGGKIDSVEKDLLKGFFQYVSSLRPRFVSFNGRTFDFPVLKYRAMVHGIQAGCLYKIGDKWNNYFQRYSIDWHC
DLLDYLSDFGTSARIKMNEVCSVLNFPGKFGLDGSKVTALYDSGKISEIRDYCETDVINTYLVYLRMMHYQDRITTLSYN
DSINDLLSYLDSSGREHFKQFRIEWDKSCGGNFYL
>Mature_275_residues
MLNSLLVFDIETIPDVDVCRNLLSDFDETVELSEKREALINYHLDITDGKNPFLRQPFHKVVAISFLKADIKKMGEYESF
HLQEIRSGGKIDSVEKDLLKGFFQYVSSLRPRFVSFNGRTFDFPVLKYRAMVHGIQAGCLYKIGDKWNNYFQRYSIDWHC
DLLDYLSDFGTSARIKMNEVCSVLNFPGKFGLDGSKVTALYDSGKISEIRDYCETDVINTYLVYLRMMHYQDRITTLSYN
DSINDLLSYLDSSGREHFKQFRIEWDKSCGGNFYL

Specific function: Unknown

COG id: COG3298

COG function: function code L; Predicted 3'-5' exonuclease related to the exonuclease domain of PolB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32034; Mature: 32034

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNSLLVFDIETIPDVDVCRNLLSDFDETVELSEKREALINYHLDITDGKNPFLRQPFHK
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHH
VVAISFLKADIKKMGEYESFHLQEIRSGGKIDSVEKDLLKGFFQYVSSLRPRFVSFNGRT
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCE
FDFPVLKYRAMVHGIQAGCLYKIGDKWNNYFQRYSIDWHCDLLDYLSDFGTSARIKMNEV
ECHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCEEEHHHH
CSVLNFPGKFGLDGSKVTALYDSGKISEIRDYCETDVINTYLVYLRMMHYQDRITTLSYN
HHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
DSINDLLSYLDSSGREHFKQFRIEWDKSCGGNFYL
CCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLNSLLVFDIETIPDVDVCRNLLSDFDETVELSEKREALINYHLDITDGKNPFLRQPFHK
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHH
VVAISFLKADIKKMGEYESFHLQEIRSGGKIDSVEKDLLKGFFQYVSSLRPRFVSFNGRT
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCE
FDFPVLKYRAMVHGIQAGCLYKIGDKWNNYFQRYSIDWHCDLLDYLSDFGTSARIKMNEV
ECHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCEEEHHHH
CSVLNFPGKFGLDGSKVTALYDSGKISEIRDYCETDVINTYLVYLRMMHYQDRITTLSYN
HHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
DSINDLLSYLDSSGREHFKQFRIEWDKSCGGNFYL
CCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA