Click here to switch to the map view.

The map label for this gene is 88657791

Identifier: 88657791

GI number: 88657791

Start: 778019

End: 778648

Strand: Reverse

Name: 88657791

Synonym: ECH_0769

Alternate gene names: NA

Gene position: 778648-778019 (Counterclockwise)

Preceding gene: 88658148

Following gene: 88658290

Centisome position: 66.2

GC content: 31.9

Gene sequence:

>630_bases
ATGTCGCACGAAAAAAATAAAGCAGTTTCAGATCTATTGGAAGAAGTTACAAGTAACGCTGATGTAGACAAAATTACATT
GTTTGAGTTAAAATCTGCACTTCATGCTCGTGGTTTTGGAGTATTGATGTTATTATTTTCTTTACCTCTTGCAATACCTA
TACCTGTTCCTCCAGGATATACAACGATATTCTCAATACCTTTATTAATGTTTGCATTCCAAATGTTGCTTGGGTTGCAA
GCTCCTTGGATGCCTAAATGGTTAGAAAAAAAGTCTTTCAAACGTACAACATTAGCTTTAATTATTGAAAAAACTGCTCC
TATATTAAGAAAAGCAGAAAAACTTACAAAGCCTCGTTTATTATTTATATTTAATAGTTTTGGAGAGAAAGTTATAGCTT
TTATTTCTCTTATATGTGCTATATCAATAGCTATACCTTTACCTTTAACGAATTTCATACCAGCTGGTGGTGTGTCAATT
ATGTCTTTGGGCATGCTTAATAAAGATGGTGTGATGGTGATTCTTGGAGTAATAGTATCATTGTTTGGTATTATTGTTAC
TCTTATGGTAGTTATTCTGGGTCCCAAACTTGTTGTAAGTATGTTTTCTTTTTTATCTAAATTTACATGA

Upstream 100 bases:

>100_bases
CTACTTGTAGATAGTAAAAATGTATAGTAAATTTTATTAATTATACAGTGTTATTTTTCTTAAAAGTATGTTATATAGTT
TTTGAAATGAGTTTGTATAT

Downstream 100 bases:

>100_bases
TCATATATAATACTTTAACTGGCATTAAAGAACCTTTTGTACCTTTTAGCATTGATAATGTAAGGGTTTATGTTTGTGGT
CCTACAGTCTATGATTTTGC

Product: exopolysaccharide synthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSHEKNKAVSDLLEEVTSNADVDKITLFELKSALHARGFGVLMLLFSLPLAIPIPVPPGYTTIFSIPLLMFAFQMLLGLQ
APWMPKWLEKKSFKRTTLALIIEKTAPILRKAEKLTKPRLLFIFNSFGEKVIAFISLICAISIAIPLPLTNFIPAGGVSI
MSLGMLNKDGVMVILGVIVSLFGIIVTLMVVILGPKLVVSMFSFLSKFT

Sequences:

>Translated_209_residues
MSHEKNKAVSDLLEEVTSNADVDKITLFELKSALHARGFGVLMLLFSLPLAIPIPVPPGYTTIFSIPLLMFAFQMLLGLQ
APWMPKWLEKKSFKRTTLALIIEKTAPILRKAEKLTKPRLLFIFNSFGEKVIAFISLICAISIAIPLPLTNFIPAGGVSI
MSLGMLNKDGVMVILGVIVSLFGIIVTLMVVILGPKLVVSMFSFLSKFT
>Mature_208_residues
SHEKNKAVSDLLEEVTSNADVDKITLFELKSALHARGFGVLMLLFSLPLAIPIPVPPGYTTIFSIPLLMFAFQMLLGLQA
PWMPKWLEKKSFKRTTLALIIEKTAPILRKAEKLTKPRLLFIFNSFGEKVIAFISLICAISIAIPLPLTNFIPAGGVSIM
SLGMLNKDGVMVILGVIVSLFGIIVTLMVVILGPKLVVSMFSFLSKFT

Specific function: Unknown

COG id: COG3932

COG function: function code R; Uncharacterized ABC-type transport system, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti exoD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010331 [H]

Pfam domain/function: PF06055 ExoD [H]

EC number: NA

Molecular weight: Translated: 22948; Mature: 22817

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHEKNKAVSDLLEEVTSNADVDKITLFELKSALHARGFGVLMLLFSLPLAIPIPVPPGY
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCH
TTIFSIPLLMFAFQMLLGLQAPWMPKWLEKKSFKRTTLALIIEKTAPILRKAEKLTKPRL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
LFIFNSFGEKVIAFISLICAISIAIPLPLTNFIPAGGVSIMSLGMLNKDGVMVILGVIVS
EEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHH
LFGIIVTLMVVILGPKLVVSMFSFLSKFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SHEKNKAVSDLLEEVTSNADVDKITLFELKSALHARGFGVLMLLFSLPLAIPIPVPPGY
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCH
TTIFSIPLLMFAFQMLLGLQAPWMPKWLEKKSFKRTTLALIIEKTAPILRKAEKLTKPRL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
LFIFNSFGEKVIAFISLICAISIAIPLPLTNFIPAGGVSIMSLGMLNKDGVMVILGVIVS
EEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHH
LFGIIVTLMVVILGPKLVVSMFSFLSKFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]