| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88657708
Identifier: 88657708
GI number: 88657708
Start: 117619
End: 118395
Strand: Direct
Name: 88657708
Synonym: ECH_0128
Alternate gene names: NA
Gene position: 117619-118395 (Clockwise)
Preceding gene: 88658053
Following gene: 88658307
Centisome position: 10.0
GC content: 29.6
Gene sequence:
>777_bases ATGCTAGCAAAAGAAGTTTGGGGATGGTTTTTTATGATGTTGATAACCACTTCTTGCTCTATATGTGCTGTTTTTTCTTA TTTAGATGTAAAAAAGGATCTAGTAGTATTTAGTCAGCAATATAGAAAAGTCATAGAAAATGATGTACGGTCTGTTTTAG TGCAGGTAAATCAAAACTTGCTTAATTCATATTTAAGTAAACAAAAGGAAAATTGTCCTGTACAGCGTATCATTACATCA GAGAATAATGATATCATAAGCTGTTCTAATGAAGAATGGCTTGCAAAGCTTTTGTTGTCTGTCATTAATTTAAGAGAAGC ATTTTTGGGAGATATATCAGTAAAAAGTATAATCTACTCAATAAAACCTATGTTACTTAAACTTGATGATTATAAAATTA ATGAGGCTGTAGCTGAGATTGAAAGATTAGATAGTAAAAAATTAACTACATTTAATAGGTTAAAATTTTCGTTCAAAAAA ATTGCTCGTGAGTTGCATTATTCGCGGTCTAATATGGTTCAAAAAGTTTTCTTTAAATGGGTTGTAGTAAAAAATCAACA AGATGCACTACTTCATAATTTAAAAGAAGTAGAAATCTACCTTGATGATAATCTTTGGAGTGATGCGTTAGATCTTTCTA GGAAGGAATTATCATCTGTTGCAGAACTAGAGCTATGGATACAACAGTTAGAAGATGTAGTATCTATGGAGAAAAACATA TCATTGATATATGATCAATTGTCAAAATATATAATTAAGTTACCTGGTGTTTCATGA
Upstream 100 bases:
>100_bases TATCTTTATTTCTATCTTTAGTTGCAGCTATTCTTCCTGCTAGAAAAGCTGCTTGTCAAGATCCAGCAGATGTTTTACGA CATGAATAGTAGGGGTTAAT
Downstream 100 bases:
>100_bases TTACAAGCGTTTTAATCTTTGTTATTGTTGCACTTACTATAGGGCTATGGGTAATAGATTGCGATGGTATCATCAGAATA GATTGGTTAGGCTATGATAT
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MLAKEVWGWFFMMLITTSCSICAVFSYLDVKKDLVVFSQQYRKVIENDVRSVLVQVNQNLLNSYLSKQKENCPVQRIITS ENNDIISCSNEEWLAKLLLSVINLREAFLGDISVKSIIYSIKPMLLKLDDYKINEAVAEIERLDSKKLTTFNRLKFSFKK IARELHYSRSNMVQKVFFKWVVVKNQQDALLHNLKEVEIYLDDNLWSDALDLSRKELSSVAELELWIQQLEDVVSMEKNI SLIYDQLSKYIIKLPGVS
Sequences:
>Translated_258_residues MLAKEVWGWFFMMLITTSCSICAVFSYLDVKKDLVVFSQQYRKVIENDVRSVLVQVNQNLLNSYLSKQKENCPVQRIITS ENNDIISCSNEEWLAKLLLSVINLREAFLGDISVKSIIYSIKPMLLKLDDYKINEAVAEIERLDSKKLTTFNRLKFSFKK IARELHYSRSNMVQKVFFKWVVVKNQQDALLHNLKEVEIYLDDNLWSDALDLSRKELSSVAELELWIQQLEDVVSMEKNI SLIYDQLSKYIIKLPGVS >Mature_258_residues MLAKEVWGWFFMMLITTSCSICAVFSYLDVKKDLVVFSQQYRKVIENDVRSVLVQVNQNLLNSYLSKQKENCPVQRIITS ENNDIISCSNEEWLAKLLLSVINLREAFLGDISVKSIIYSIKPMLLKLDDYKINEAVAEIERLDSKKLTTFNRLKFSFKK IARELHYSRSNMVQKVFFKWVVVKNQQDALLHNLKEVEIYLDDNLWSDALDLSRKELSSVAELELWIQQLEDVVSMEKNI SLIYDQLSKYIIKLPGVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30104; Mature: 30104
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAKEVWGWFFMMLITTSCSICAVFSYLDVKKDLVVFSQQYRKVIENDVRSVLVQVNQNL CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNSYLSKQKENCPVQRIITSENNDIISCSNEEWLAKLLLSVINLREAFLGDISVKSIIYS HHHHHHHHHHCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKPMLLKLDDYKINEAVAEIERLDSKKLTTFNRLKFSFKKIARELHYSRSNMVQKVFFKW HHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVVKNQQDALLHNLKEVEIYLDDNLWSDALDLSRKELSSVAELELWIQQLEDVVSMEKNI HHCCCCHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLIYDQLSKYIIKLPGVS HHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLAKEVWGWFFMMLITTSCSICAVFSYLDVKKDLVVFSQQYRKVIENDVRSVLVQVNQNL CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNSYLSKQKENCPVQRIITSENNDIISCSNEEWLAKLLLSVINLREAFLGDISVKSIIYS HHHHHHHHHHCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKPMLLKLDDYKINEAVAEIERLDSKKLTTFNRLKFSFKKIARELHYSRSNMVQKVFFKW HHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVVKNQQDALLHNLKEVEIYLDDNLWSDALDLSRKELSSVAELELWIQQLEDVVSMEKNI HHCCCCHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLIYDQLSKYIIKLPGVS HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA