Click here to switch to the map view.

The map label for this gene is 88608826

Identifier: 88608826

GI number: 88608826

Start: 628297

End: 628917

Strand: Reverse

Name: 88608826

Synonym: NSE_0708

Alternate gene names: NA

Gene position: 628917-628297 (Counterclockwise)

Preceding gene: 88608063

Following gene: 88608296

Centisome position: 73.21

GC content: 37.2

Gene sequence:

>621_bases
ATGTCTATACTTAACAAGGATTGTAAGATTCAAAGTATACTGAATTCATTAATTTCTAGTGTTTTTCATGATCTTGGTAA
TTGCGTTTCTCTATTGAGCTTGTTGGTCGAGGTTAATAGAGATGACCCAAAAGCCTTTGATTTTAATGAGTTGCTTGAGG
TAAATTCTCGAATGCTCATAAACTTGCGTGTTCTGCAGTATATGTTCCTCAGAGGAAGTAAAGGTGCGAGGGCATTAGCA
GATATTGAGCAGTATTTGCTCTATAAGGGAAAAAAGGCGGTTTTCCACTTCGGTATTGAGTCTATCCAGGATGAATTCTT
TGTTCTGATGCTGCATTCGTTGCTCCTCCTGAGCAGATTGTTTACTGACTATGCTAAAATTGATGTTTTTGCAGCCGATA
TGGAACTGAAGTTCATTGTAGTTTCTGATACTCCAATAGATGAAGAGCGACTTAAATTGTTTGATATCATTAGTTCTGGT
TCTGAGGATGAAATAGAACTTCCAGAGCACTATAGAGCTCACTTGTACTACATAAAGGGGCTTTTGAGGGATTTAGGATT
GCATATTAATACCACCTTTAAGCCTAAAGAGTTCATGTTGCGTATTTTTCCTCGTAATTGA

Upstream 100 bases:

>100_bases
ATCAGCCATGAAACCTCCCTGGATGTTTGAACAGCTAAGATGTTATGTATCAAAACTTCCGCGACCATGTTAACCTTTGG
AAGGGTGACTAGTCAATCAG

Downstream 100 bases:

>100_bases
TGCAATACGTTGTCGTGATCGGCGGGGGTCATGCTGGAGTTGAAGCTGCTGCTGCATCTGCAAGGCTTGGTGTTGAAACG
CTCCTTGTGACAAACAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MSILNKDCKIQSILNSLISSVFHDLGNCVSLLSLLVEVNRDDPKAFDFNELLEVNSRMLINLRVLQYMFLRGSKGARALA
DIEQYLLYKGKKAVFHFGIESIQDEFFVLMLHSLLLLSRLFTDYAKIDVFAADMELKFIVVSDTPIDEERLKLFDIISSG
SEDEIELPEHYRAHLYYIKGLLRDLGLHINTTFKPKEFMLRIFPRN

Sequences:

>Translated_206_residues
MSILNKDCKIQSILNSLISSVFHDLGNCVSLLSLLVEVNRDDPKAFDFNELLEVNSRMLINLRVLQYMFLRGSKGARALA
DIEQYLLYKGKKAVFHFGIESIQDEFFVLMLHSLLLLSRLFTDYAKIDVFAADMELKFIVVSDTPIDEERLKLFDIISSG
SEDEIELPEHYRAHLYYIKGLLRDLGLHINTTFKPKEFMLRIFPRN
>Mature_205_residues
SILNKDCKIQSILNSLISSVFHDLGNCVSLLSLLVEVNRDDPKAFDFNELLEVNSRMLINLRVLQYMFLRGSKGARALAD
IEQYLLYKGKKAVFHFGIESIQDEFFVLMLHSLLLLSRLFTDYAKIDVFAADMELKFIVVSDTPIDEERLKLFDIISSGS
EDEIELPEHYRAHLYYIKGLLRDLGLHINTTFKPKEFMLRIFPRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23883; Mature: 23752

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILNKDCKIQSILNSLISSVFHDLGNCVSLLSLLVEVNRDDPKAFDFNELLEVNSRMLI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHH
NLRVLQYMFLRGSKGARALADIEQYLLYKGKKAVFHFGIESIQDEFFVLMLHSLLLLSRL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
FTDYAKIDVFAADMELKFIVVSDTPIDEERLKLFDIISSGSEDEIELPEHYRAHLYYIKG
HHHHHHHEEEEECCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
LLRDLGLHINTTFKPKEFMLRIFPRN
HHHHCCCCCCCCCCHHHHHEEECCCC
>Mature Secondary Structure 
SILNKDCKIQSILNSLISSVFHDLGNCVSLLSLLVEVNRDDPKAFDFNELLEVNSRMLI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHH
NLRVLQYMFLRGSKGARALADIEQYLLYKGKKAVFHFGIESIQDEFFVLMLHSLLLLSRL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
FTDYAKIDVFAADMELKFIVVSDTPIDEERLKLFDIISSGSEDEIELPEHYRAHLYYIKG
HHHHHHHEEEEECCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
LLRDLGLHINTTFKPKEFMLRIFPRN
HHHHCCCCCCCCCCHHHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA