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The map label for this gene is yhgI [C]

Identifier: 88608783

GI number: 88608783

Start: 728057

End: 728599

Strand: Reverse

Name: yhgI [C]

Synonym: NSE_0817

Alternate gene names: 88608783

Gene position: 728599-728057 (Counterclockwise)

Preceding gene: 88608262

Following gene: 88608481

Centisome position: 84.82

GC content: 41.8

Gene sequence:

>543_bases
ATGTTTATCCAAACTGAGCACACCCCGAATCCGAACGTACTAAAATTTTTTCCTGGTGTAAAAATACTTGATAGTGGAAC
TGCTGATTTTGTCACGTTTAGTGATGCCTCTGGTCATAAACTTCCTGAGATGCTTTGGGAAATACAAGGTGTCTGCGGTG
TAATGCTTGGGGTGGATTTTGTATCTGTGAGCAAAACTGAAGATGCAGAATGGGATGTATTGAAGCCACAGATCTTTGGT
GTGCTGGTTGAGTATTTTACTACTGGATCCGATTTTGTTCGACCTGTCACAGAAGACGAGGAAGTCGAATGCACCGACGA
GGTTTCTAAGAAAATACAGGAAATTATAGATACTAAAGTCCGACCTTCCGTTATCGAAGATGGTGGTAACATTGTATTTA
AGGGTTATAAGGATGGGATTGTATATCTGAAACTTCAGGGTGCGTGTGCCGGTTGTCCTAGTGCTTCTGTCACTCTCAAG
GATGGTATAGAGAATCTGCTTCAGTACTATATTCCTGAAGTGAGAGAAGTTCAGCAGGTTTGA

Upstream 100 bases:

>100_bases
AGCAAGATCGTAAAGAACATTTATGAGCGTTGAAACTAGTAGGTATTGTATATTATAATCCGGCCGTAGTTAACAAGTAA
TTGTCCGGTGCACTTAAAGT

Downstream 100 bases:

>100_bases
TGGATAGGTTCCTTGTTGCATGGGTATCTTTTCAGGTTCGTACGTCGGTACGGTGTTCTTTTTGTGTTGCCGTTTCTTTG
AGAACGTGACCCCTTGTGGT

Product: NifU-like domain-containing protein

Products: NA

Alternate protein names: Nitrogen-Fixing NifU Domain Protein; NifU Domain Protein; NifU Domain-Containing Protein; Nitrogen-Fixing NifU-Like; Nitrogen Fixation Protein; NifU-Like Protein; NifU Related Protein; Nitrogen-Fixing NifU Domain-Containing Protein; NifU-Like Domain-Containing Protein; NifU Protein; Nitrogen-Fixing NifU-Like Protein; Scaffold Protein Nfu/Nifu; NifU-Like Domain Protein; NifU Family Protein; Thioredoxin-Like Protein; Nitrogen-Fixing NifU; NifU Iron-Sulphur Cluster Scaffold Protein; Nif System Fes Cluster Assembly Nifu Family Protein; Thioredoxin-Related Protein; Thioredoxin-Like Domain Protein; Scaffold Protein Nfu/NifU N Terminal Domain Protein; Nitrogen-Fixing Nifu Domain Protein; Nitrogen-Fixing Protein NifU; Iron-Sulfur Cluster Assembly Protein; Nitrogen Fixing Thioredoxin-Like Protein NifU; Nitrogen-Fixing Protein; NFU1 Iron-Sulfur Cluster Scaffold-Like Protein; Fe-S Cluster Assembly Protein NFU; Nifu Protein; NifU Domain Containing Protein; HIRA-Interacting; Nitrogen-Fixing NifU C-Terminal; Scaffold Protein Nfu/NifU-Like Protein; Scaffold Protein Nfu/NifU N Terminal; NitrogeN-Fixing Nifu Domain Protein; Thioredoxin

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MFIQTEHTPNPNVLKFFPGVKILDSGTADFVTFSDASGHKLPEMLWEIQGVCGVMLGVDFVSVSKTEDAEWDVLKPQIFG
VLVEYFTTGSDFVRPVTEDEEVECTDEVSKKIQEIIDTKVRPSVIEDGGNIVFKGYKDGIVYLKLQGACAGCPSASVTLK
DGIENLLQYYIPEVREVQQV

Sequences:

>Translated_180_residues
MFIQTEHTPNPNVLKFFPGVKILDSGTADFVTFSDASGHKLPEMLWEIQGVCGVMLGVDFVSVSKTEDAEWDVLKPQIFG
VLVEYFTTGSDFVRPVTEDEEVECTDEVSKKIQEIIDTKVRPSVIEDGGNIVFKGYKDGIVYLKLQGACAGCPSASVTLK
DGIENLLQYYIPEVREVQQV
>Mature_180_residues
MFIQTEHTPNPNVLKFFPGVKILDSGTADFVTFSDASGHKLPEMLWEIQGVCGVMLGVDFVSVSKTEDAEWDVLKPQIFG
VLVEYFTTGSDFVRPVTEDEEVECTDEVSKKIQEIIDTKVRPSVIEDGGNIVFKGYKDGIVYLKLQGACAGCPSASVTLK
DGIENLLQYYIPEVREVQQV

Specific function: Unknown

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI50593021, Length=183, Percent_Identity=48.6338797814208, Blast_Score=183, Evalue=6e-47,
Organism=Homo sapiens, GI50593025, Length=183, Percent_Identity=48.6338797814208, Blast_Score=183, Evalue=6e-47,
Organism=Homo sapiens, GI50593023, Length=100, Percent_Identity=51, Blast_Score=108, Evalue=3e-24,
Organism=Homo sapiens, GI50593019, Length=100, Percent_Identity=51, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17541876, Length=184, Percent_Identity=45.6521739130435, Blast_Score=164, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6322811, Length=206, Percent_Identity=37.378640776699, Blast_Score=124, Evalue=7e-30,
Organism=Drosophila melanogaster, GI45551492, Length=184, Percent_Identity=48.9130434782609, Blast_Score=190, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24643765, Length=184, Percent_Identity=48.9130434782609, Blast_Score=190, Evalue=4e-49,
Organism=Drosophila melanogaster, GI45556188, Length=184, Percent_Identity=48.9130434782609, Blast_Score=190, Evalue=4e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19944; Mature: 19944

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIQTEHTPNPNVLKFFPGVKILDSGTADFVTFSDASGHKLPEMLWEIQGVCGVMLGVDF
CCCCCCCCCCCCEEEECCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
VSVSKTEDAEWDVLKPQIFGVLVEYFTTGSDFVRPVTEDEEVECTDEVSKKIQEIIDTKV
EECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC
RPSVIEDGGNIVFKGYKDGIVYLKLQGACAGCPSASVTLKDGIENLLQYYIPEVREVQQV
CCCEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure
MFIQTEHTPNPNVLKFFPGVKILDSGTADFVTFSDASGHKLPEMLWEIQGVCGVMLGVDF
CCCCCCCCCCCCEEEECCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
VSVSKTEDAEWDVLKPQIFGVLVEYFTTGSDFVRPVTEDEEVECTDEVSKKIQEIIDTKV
EECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC
RPSVIEDGGNIVFKGYKDGIVYLKLQGACAGCPSASVTLKDGIENLLQYYIPEVREVQQV
CCCEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA