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The map label for this gene is 88608773

Identifier: 88608773

GI number: 88608773

Start: 381860

End: 382969

Strand: Reverse

Name: 88608773

Synonym: NSE_0466

Alternate gene names: NA

Gene position: 382969-381860 (Counterclockwise)

Preceding gene: 88608144

Following gene: 88607966

Centisome position: 44.58

GC content: 35.77

Gene sequence:

>1110_bases
ATGGACACAAGAGTAAATAATTTACTTCTAAACCTCGAAACAGAAATTAAATCTTTTAAAGAGAAAGAAGACGAAAGATT
ACAGAGTTGTGAGAGAAGATTAAAAAAACTAGAAGATGGCTATGACTTGGCTGTGAAACGACCTTTTACTTCGACCGAAA
TAAGCGAAGATTGTCATTATAAGAAGCAACTCAATAGTTATCTTAAGAAGGGATCAGCAAATTCCATTGAAATCAAGAGT
AATGGCTTTCCACTAACAGATACCTTAATTAACTCAATCCATGAGCAAATGAAGAAGCTCTCCCCAATAAGGAAGCTAGC
ATCTGTTAATACGATCTCAACAGACTGTATAACTTACATAAGCAATGGTGACGCGTTAGAGGCACAATGGGTTTCTGAGG
ATGAGATAACTAATAGCGATGCAAAAGAGCACATAATCACAACAGAAATAAATACCTATGAGCTCTACACACAACCAAAG
ACCACTCAAAAAGTCCTTGATGATCCATCTATAAACGTAGAAAAATGGTTAATTGAACAGGCTGCTTTGGCATTTACACA
ACTCGAAAACGAAACCTTCATTACTGGTGATGGAAAAAATAAACCACACGGAATACTTCAACATAATACAGATTCCACAG
GAAAACAGATTTGTAAGATCACAAGCAAGGAGAAAGACAAAATAACCCCTGCTGATATTTTAAGCCTCTATTATGGATTA
CAAAGAGAGTTCTCTGTTAATGGAACATTTCTTATGCACAGTACAACTATCCAGCTAATAAGAGGGCTAAAATATGAACA
GACAGGACACTATATGTTTCAGCCAGGAATTTTAGTAGGTCAACCCGACACGTTAATGGGAATACCTGTTATTGAGTGCT
CAGAAATGCCTATAATACCAATATCTGATAAATCTACGAGTTCAACAAAGAAATATCCAATCATTTTTGGAGATTTTAAG
CGTGGATATCAAATCGTCGATAGAAGCGAAATGCGGGTTCTAAGAGATCCATACTCTGCAAAACCTTATGTTTCTTTCTA
TATTACCAAAAGGGTTGGCGCAAAGGTAATTAATCCAAAGGCTTTTGTTTTTTTGGAAATGAAATCCTAA

Upstream 100 bases:

>100_bases
TTTCATCTGTAAGACCCAAATTCCTATGTAGTAATAATGTTCTGCTTCCTCATAAGTGGATAAACGAAATAAACTAACTT
TTTAATTTATAATCAACTAA

Downstream 100 bases:

>100_bases
ATTGAATACTTGACTATTGTCTCCAGATTACTGGAAACTAAACTTCATTAGGTCAAGGCTTACTGTGTACACCAATGCTA
TTGTTGGTGTACACTCTCCC

Product: HK97 family phage major capsid protein

Products: NA

Alternate protein names: HK97 Family Phage Capsid Protein; Phage Capsid Protein HK; Capsid Protein; HK97 Family Capsid Protein; Capsid Protein Of Prophage; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Capsid Family; Phage Prohead Protease; Prophage; Phage Capsid Protein Gp; Phage Prohead Protease And Phage Capsid Protein; Phage Phi-C31 Capsid; Capsid C; Phage Capsid Family Protein

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MDTRVNNLLLNLETEIKSFKEKEDERLQSCERRLKKLEDGYDLAVKRPFTSTEISEDCHYKKQLNSYLKKGSANSIEIKS
NGFPLTDTLINSIHEQMKKLSPIRKLASVNTISTDCITYISNGDALEAQWVSEDEITNSDAKEHIITTEINTYELYTQPK
TTQKVLDDPSINVEKWLIEQAALAFTQLENETFITGDGKNKPHGILQHNTDSTGKQICKITSKEKDKITPADILSLYYGL
QREFSVNGTFLMHSTTIQLIRGLKYEQTGHYMFQPGILVGQPDTLMGIPVIECSEMPIIPISDKSTSSTKKYPIIFGDFK
RGYQIVDRSEMRVLRDPYSAKPYVSFYITKRVGAKVINPKAFVFLEMKS

Sequences:

>Translated_369_residues
MDTRVNNLLLNLETEIKSFKEKEDERLQSCERRLKKLEDGYDLAVKRPFTSTEISEDCHYKKQLNSYLKKGSANSIEIKS
NGFPLTDTLINSIHEQMKKLSPIRKLASVNTISTDCITYISNGDALEAQWVSEDEITNSDAKEHIITTEINTYELYTQPK
TTQKVLDDPSINVEKWLIEQAALAFTQLENETFITGDGKNKPHGILQHNTDSTGKQICKITSKEKDKITPADILSLYYGL
QREFSVNGTFLMHSTTIQLIRGLKYEQTGHYMFQPGILVGQPDTLMGIPVIECSEMPIIPISDKSTSSTKKYPIIFGDFK
RGYQIVDRSEMRVLRDPYSAKPYVSFYITKRVGAKVINPKAFVFLEMKS
>Mature_369_residues
MDTRVNNLLLNLETEIKSFKEKEDERLQSCERRLKKLEDGYDLAVKRPFTSTEISEDCHYKKQLNSYLKKGSANSIEIKS
NGFPLTDTLINSIHEQMKKLSPIRKLASVNTISTDCITYISNGDALEAQWVSEDEITNSDAKEHIITTEINTYELYTQPK
TTQKVLDDPSINVEKWLIEQAALAFTQLENETFITGDGKNKPHGILQHNTDSTGKQICKITSKEKDKITPADILSLYYGL
QREFSVNGTFLMHSTTIQLIRGLKYEQTGHYMFQPGILVGQPDTLMGIPVIECSEMPIIPISDKSTSSTKKYPIIFGDFK
RGYQIVDRSEMRVLRDPYSAKPYVSFYITKRVGAKVINPKAFVFLEMKS

Specific function: Unknown

COG id: COG4653

COG function: function code R; Predicted phage phi-C31 gp36 major capsid-like protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42022; Mature: 42022

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTRVNNLLLNLETEIKSFKEKEDERLQSCERRLKKLEDGYDLAVKRPFTSTEISEDCHY
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHH
KKQLNSYLKKGSANSIEIKSNGFPLTDTLINSIHEQMKKLSPIRKLASVNTISTDCITYI
HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEE
SNGDALEAQWVSEDEITNSDAKEHIITTEINTYELYTQPKTTQKVLDDPSINVEKWLIEQ
CCCCEEEEEECCCCCCCCCCCCCCEEEEECCEEEEEECCCHHHHHHCCCCCCHHHHHHHH
AALAFTQLENETFITGDGKNKPHGILQHNTDSTGKQICKITSKEKDKITPADILSLYYGL
HHHHHHHCCCCEEEECCCCCCCCCCEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCC
QREFSVNGTFLMHSTTIQLIRGLKYEQTGHYMFQPGILVGQPDTLMGIPVIECSEMPIIP
CCEEECCCEEEEEHHHHHHHHCCCCCCCCCEEECCCEEECCCCCEECCCEEEECCCCEEE
ISDKSTSSTKKYPIIFGDFKRGYQIVDRSEMRVLRDPYSAKPYVSFYITKRVGAKVINPK
CCCCCCCCCCCCCEEECCCCCCCEECCHHHHHHHCCCCCCCCEEEEEEEECCCCEEECCC
AFVFLEMKS
EEEEEEECC
>Mature Secondary Structure
MDTRVNNLLLNLETEIKSFKEKEDERLQSCERRLKKLEDGYDLAVKRPFTSTEISEDCHY
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHH
KKQLNSYLKKGSANSIEIKSNGFPLTDTLINSIHEQMKKLSPIRKLASVNTISTDCITYI
HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEE
SNGDALEAQWVSEDEITNSDAKEHIITTEINTYELYTQPKTTQKVLDDPSINVEKWLIEQ
CCCCEEEEEECCCCCCCCCCCCCCEEEEECCEEEEEECCCHHHHHHCCCCCCHHHHHHHH
AALAFTQLENETFITGDGKNKPHGILQHNTDSTGKQICKITSKEKDKITPADILSLYYGL
HHHHHHHCCCCEEEECCCCCCCCCCEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCC
QREFSVNGTFLMHSTTIQLIRGLKYEQTGHYMFQPGILVGQPDTLMGIPVIECSEMPIIP
CCEEECCCEEEEEHHHHHHHHCCCCCCCCCEEECCCEEECCCCCEECCCEEEECCCCEEE
ISDKSTSSTKKYPIIFGDFKRGYQIVDRSEMRVLRDPYSAKPYVSFYITKRVGAKVINPK
CCCCCCCCCCCCCEEECCCCCCCEECCHHHHHHHCCCCCCCCEEEEEEEECCCCEEECCC
AFVFLEMKS
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA