| Definition | Neorickettsia sennetsu str. Miyayama chromosome, complete genome. |
|---|---|
| Accession | NC_007798 |
| Length | 859,006 |
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The map label for this gene is gpmI
Identifier: 88608772
GI number: 88608772
Start: 795212
End: 796684
Strand: Direct
Name: gpmI
Synonym: NSE_0891
Alternate gene names: 88608772
Gene position: 795212-796684 (Clockwise)
Preceding gene: 88607963
Following gene: 88608152
Centisome position: 92.57
GC content: 42.36
Gene sequence:
>1473_bases ATGCCTTTAATTTTGTGTATACTAGACGGCTGGGGTGTCTTACCCCAAGATGAATATAATGCTATCTACCAAGCTAGAAC TCCGCACTATTGCACACTGTTAGAAAAGTTTCCACATTCACTTCTCTCTGCAAGTAGCCTAGAAGTAGGTTTGCCAGAGG GGCAAATGGGTAATTCAGAAGTTGGTCACATGACGATAGGTAGTGGCAGAATTATATATCATGATCTTGTTCGAATTAAC CGCGAGCTCGAAAAAATTGACAAAAACCCTCAGCTAAATGTCTTTGCAAATAAACTCAAAGGAAAGAGGTGTCATCTTGT TGGACTCTTATCTGATGGAGGAGTACACTCTCACGTCGCACATATAAACAAAATCTCGAACTACCTCACATCGCGTGGAG TAGCTGTATGCATACACGCATTCCTAGATGGTCGTGACACAGCACCAAAAGCAGCGAAGCGATATATCACAGAAGAGAAC ACAAGAAGAATTGCGACTCTGGCTGGGCGCTACTATGGTATGGACAGAGATAAAAATTGGGACCGAACAGTCGAAGCGTA TCGTGTTATTGTGAAACCATCAAAGCAGCAAAGAATCTTCGAAAAAGCAGATGAGGCCATAGAATATTACTATTCTCAGG GCATAAGCGACGAGTTCATTCCACCATCAGTGATTGGTGACTATGAAGGTGCACAAGATGGGGACGGACTTTTTATAGCA AATTTCCGTCCGGATAGAGCAAGACAAATCACCTCTGAGCTTATTGGTAAAACAAGCTTCTGCAAAGACAAGATAAAATT CTCAGAAATGATGACAATGAGCCAGTACTTTGAAGAATCCTTACCATCATTAATCCTACGACAGCAGATTAAGAATACTC TATCGGAGATCATCTCAGGTGCCGGAATGCACCAGCTCAAAATAGCGGAGACCGAAAAATATGCTCATGTGAGTTACTTC TTCAATGGAGGAAAAGAAGCAGCTTTTGCAAGAGAAGAGCGTATTCTGATAAACTCGCCACGCGTAAAGACGTATGATTT GGAACCAAAAATGGCAGCCTTAGAAGTAACTGATGCCCTTATCAAGGCAATAAAGTCAAAAAGATTTGATTTCATTGTGG TCAACTACGCAAACGCCGATATGGTAGGCCACACCGGAAACTTGTCAGCAACTATCGAGGCAATAGAGACACTAGATAAT TGCCTTGGCAAACTATACAAAGAGGCCTGTGAACTTAATGGGTACGAAATGATAGTTACCTCAGATCATGGTAACGCAGA ATGTATGTACGACCATTCTACAAAGCTTTCAAACACAGCTCACACAACGAACCCAGTACCATTCATCGTAGCGTCACAGA GGGTGAAGCATGTAAACAACGGAGGCCTATATAATATCGCTGGGACTGTCCTCAAGCTTCTCGGTATAGAGAAGCCAACA GAACTAGCTAATGACCTTATTTGCTTCGAGTAA
Upstream 100 bases:
>100_bases ACTGTGAAAATATAATGCAAGAATTCGAGTGATATGTTACAATCCGCCCGGGTGTTTCAACTGCACCGGGTTGGACCTTT TGTTCGCTTGATCCCAGTAA
Downstream 100 bases:
>100_bases TCGACACGGAACCCCTAAACCTGTTCTTCAACTAGGATCCGCTCCTCAATATCAGTGTCATGATAGATCTCTTCCTCTTC GTACGGTACACGTACTGAAG
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MPLILCILDGWGVLPQDEYNAIYQARTPHYCTLLEKFPHSLLSASSLEVGLPEGQMGNSEVGHMTIGSGRIIYHDLVRIN RELEKIDKNPQLNVFANKLKGKRCHLVGLLSDGGVHSHVAHINKISNYLTSRGVAVCIHAFLDGRDTAPKAAKRYITEEN TRRIATLAGRYYGMDRDKNWDRTVEAYRVIVKPSKQQRIFEKADEAIEYYYSQGISDEFIPPSVIGDYEGAQDGDGLFIA NFRPDRARQITSELIGKTSFCKDKIKFSEMMTMSQYFEESLPSLILRQQIKNTLSEIISGAGMHQLKIAETEKYAHVSYF FNGGKEAAFAREERILINSPRVKTYDLEPKMAALEVTDALIKAIKSKRFDFIVVNYANADMVGHTGNLSATIEAIETLDN CLGKLYKEACELNGYEMIVTSDHGNAECMYDHSTKLSNTAHTTNPVPFIVASQRVKHVNNGGLYNIAGTVLKLLGIEKPT ELANDLICFE
Sequences:
>Translated_490_residues MPLILCILDGWGVLPQDEYNAIYQARTPHYCTLLEKFPHSLLSASSLEVGLPEGQMGNSEVGHMTIGSGRIIYHDLVRIN RELEKIDKNPQLNVFANKLKGKRCHLVGLLSDGGVHSHVAHINKISNYLTSRGVAVCIHAFLDGRDTAPKAAKRYITEEN TRRIATLAGRYYGMDRDKNWDRTVEAYRVIVKPSKQQRIFEKADEAIEYYYSQGISDEFIPPSVIGDYEGAQDGDGLFIA NFRPDRARQITSELIGKTSFCKDKIKFSEMMTMSQYFEESLPSLILRQQIKNTLSEIISGAGMHQLKIAETEKYAHVSYF FNGGKEAAFAREERILINSPRVKTYDLEPKMAALEVTDALIKAIKSKRFDFIVVNYANADMVGHTGNLSATIEAIETLDN CLGKLYKEACELNGYEMIVTSDHGNAECMYDHSTKLSNTAHTTNPVPFIVASQRVKHVNNGGLYNIAGTVLKLLGIEKPT ELANDLICFE >Mature_489_residues PLILCILDGWGVLPQDEYNAIYQARTPHYCTLLEKFPHSLLSASSLEVGLPEGQMGNSEVGHMTIGSGRIIYHDLVRINR ELEKIDKNPQLNVFANKLKGKRCHLVGLLSDGGVHSHVAHINKISNYLTSRGVAVCIHAFLDGRDTAPKAAKRYITEENT RRIATLAGRYYGMDRDKNWDRTVEAYRVIVKPSKQQRIFEKADEAIEYYYSQGISDEFIPPSVIGDYEGAQDGDGLFIAN FRPDRARQITSELIGKTSFCKDKIKFSEMMTMSQYFEESLPSLILRQQIKNTLSEIISGAGMHQLKIAETEKYAHVSYFF NGGKEAAFAREERILINSPRVKTYDLEPKMAALEVTDALIKAIKSKRFDFIVVNYANADMVGHTGNLSATIEAIETLDNC LGKLYKEACELNGYEMIVTSDHGNAECMYDHSTKLSNTAHTTNPVPFIVASQRVKHVNNGGLYNIAGTVLKLLGIEKPTE LANDLICFE
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=501, Percent_Identity=42.7145708582834, Blast_Score=397, Evalue=1e-111, Organism=Caenorhabditis elegans, GI32564249, Length=506, Percent_Identity=37.3517786561265, Blast_Score=311, Evalue=7e-85, Organism=Caenorhabditis elegans, GI17507741, Length=506, Percent_Identity=37.3517786561265, Blast_Score=310, Evalue=1e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 54875; Mature: 54744
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLILCILDGWGVLPQDEYNAIYQARTPHYCTLLEKFPHSLLSASSLEVGLPEGQMGNSE CCEEEEEECCCCCCCCCHHHHHEECCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCC VGHMTIGSGRIIYHDLVRINRELEKIDKNPQLNVFANKLKGKRCHLVGLLSDGGVHSHVA CCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCEEEEEEEECCCCHHHHHH HINKISNYLTSRGVAVCIHAFLDGRDTAPKAAKRYITEENTRRIATLAGRYYGMDRDKNW HHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCH DRTVEAYRVIVKPSKQQRIFEKADEAIEYYYSQGISDEFIPPSVIGDYEGAQDGDGLFIA HHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCEEEE NFRPDRARQITSELIGKTSFCKDKIKFSEMMTMSQYFEESLPSLILRQQIKNTLSEIISG CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AGMHQLKIAETEKYAHVSYFFNGGKEAAFAREERILINSPRVKTYDLEPKMAALEVTDAL CCCCEEEEECCCCEEEEEEEECCCCCCHHHHCCEEEEECCCEEEEECCCCHHHHHHHHHH IKAIKSKRFDFIVVNYANADMVGHTGNLSATIEAIETLDNCLGKLYKEACELNGYEMIVT HHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE SDHGNAECMYDHSTKLSNTAHTTNPVPFIVASQRVKHVNNGGLYNIAGTVLKLLGIEKPT CCCCCEEEEEECCCCCCCCCCCCCCCEEEEECHHHHHCCCCCEEHHHHHHHHHHCCCCCH ELANDLICFE HHHCCCCCCC >Mature Secondary Structure PLILCILDGWGVLPQDEYNAIYQARTPHYCTLLEKFPHSLLSASSLEVGLPEGQMGNSE CEEEEEECCCCCCCCCHHHHHEECCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCC VGHMTIGSGRIIYHDLVRINRELEKIDKNPQLNVFANKLKGKRCHLVGLLSDGGVHSHVA CCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCEEEEEEEECCCCHHHHHH HINKISNYLTSRGVAVCIHAFLDGRDTAPKAAKRYITEENTRRIATLAGRYYGMDRDKNW HHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCH DRTVEAYRVIVKPSKQQRIFEKADEAIEYYYSQGISDEFIPPSVIGDYEGAQDGDGLFIA HHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCEEEE NFRPDRARQITSELIGKTSFCKDKIKFSEMMTMSQYFEESLPSLILRQQIKNTLSEIISG CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AGMHQLKIAETEKYAHVSYFFNGGKEAAFAREERILINSPRVKTYDLEPKMAALEVTDAL CCCCEEEEECCCCEEEEEEEECCCCCCHHHHCCEEEEECCCEEEEECCCCHHHHHHHHHH IKAIKSKRFDFIVVNYANADMVGHTGNLSATIEAIETLDNCLGKLYKEACELNGYEMIVT HHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE SDHGNAECMYDHSTKLSNTAHTTNPVPFIVASQRVKHVNNGGLYNIAGTVLKLLGIEKPT CCCCCEEEEEECCCCCCCCCCCCCCCEEEEECHHHHHCCCCCEEHHHHHHHHHHCCCCCH ELANDLICFE HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA