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The map label for this gene is 88608691

Identifier: 88608691

GI number: 88608691

Start: 655545

End: 656363

Strand: Reverse

Name: 88608691

Synonym: NSE_0735

Alternate gene names: NA

Gene position: 656363-655545 (Counterclockwise)

Preceding gene: 88608886

Following gene: 88608407

Centisome position: 76.41

GC content: 40.54

Gene sequence:

>819_bases
ATGGATTCCATAGTTGTCTTCGATATAGAAACCATTCCTGATACGGGCCTATGTGAGGTACTTACGGGTTTTAAAGGTAA
AGATGTTGCCGTAATGCGAAAGGCTATGGAAGATTATCATTTGGACATTACAGATGGTAAGAACCCGTTTCTCAGGCAGC
CCTTTCACAAGGTTATTGTAATATCGCTGCTTAAAGCGACGCTGACTTGTAAAAATGATTGTGAGTTCTTTCAGCTAAAA
AAAATTGCTTCTGGAGATATTCAGTGCTACAGCGAAAAAGAACTAGTACAGTTCTTTTTTGATCATGTATGTAAGTCACT
ACCTAGGCTTGTTTCTTTCAATGGTAGGACTTTCGATCTCCCTGTCTTAAAGTACCGTGCGATGCGTTACGGTGTCGTTG
CCCGTAATTTTTATCATTCCGGTGATAAGTGGAACAGTTATAATAACAAGTACAGCGCGAACTGGCACACCGACCTGATT
GATTTGCTTTCTGAGTATGGAGTTTCAGCAAGGGTCAAGATGAGTGAAGTCTGTGCAGTACTTGGATTGCCCGGAAAACT
TGGTATCGATGGTGCACAGGTTGCGCACATGTACGATGCTGGAAGAATCACAGAAATTAGAAATTATTGTGAGATAGATG
TTTTGAATACTTACTTGATCTACTTAACTGTACTCAGGCACCAGGGGACAGTTTCAGAGGAGAGTTACGCAAGAAACCTA
CATGAGTTGATGCGTTATCTCGAAAGAAATGAAAAGGATAATCCTAGTTACTTGCCTTTTTTACGATCTCTTAAAGCGAG
TGAGATAGTGCGTTTTTAA

Upstream 100 bases:

>100_bases
AAATGTCTGTGTGTAAATTATCCTTTTTGGAAATTGTGGTCTACTCAGGAATAGTTGGTTGGGGTGTGCTTCTCAGGGAG
AATTGCTTGGTTTGAATGAT

Downstream 100 bases:

>100_bases
ATTCTAAGGTGCCTGGTTACAGTTTTCTTTCTGGGAAAGTGATGTGGAAATTGTTACCAGTGGTGCATTGTTAACGTCGA
TAATATTTACATGGGGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Polysaccharide Biosynthesis Protein; 3-5' Exonuclease PolB-Like Protein; Propable PolB; Polysaccharide Biosynthesis Protein WlaX; Lipoprotein SmpA/OmlA Family; 3&Apos; Large-Conductance Mechanosensitive Channel

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MDSIVVFDIETIPDTGLCEVLTGFKGKDVAVMRKAMEDYHLDITDGKNPFLRQPFHKVIVISLLKATLTCKNDCEFFQLK
KIASGDIQCYSEKELVQFFFDHVCKSLPRLVSFNGRTFDLPVLKYRAMRYGVVARNFYHSGDKWNSYNNKYSANWHTDLI
DLLSEYGVSARVKMSEVCAVLGLPGKLGIDGAQVAHMYDAGRITEIRNYCEIDVLNTYLIYLTVLRHQGTVSEESYARNL
HELMRYLERNEKDNPSYLPFLRSLKASEIVRF

Sequences:

>Translated_272_residues
MDSIVVFDIETIPDTGLCEVLTGFKGKDVAVMRKAMEDYHLDITDGKNPFLRQPFHKVIVISLLKATLTCKNDCEFFQLK
KIASGDIQCYSEKELVQFFFDHVCKSLPRLVSFNGRTFDLPVLKYRAMRYGVVARNFYHSGDKWNSYNNKYSANWHTDLI
DLLSEYGVSARVKMSEVCAVLGLPGKLGIDGAQVAHMYDAGRITEIRNYCEIDVLNTYLIYLTVLRHQGTVSEESYARNL
HELMRYLERNEKDNPSYLPFLRSLKASEIVRF
>Mature_272_residues
MDSIVVFDIETIPDTGLCEVLTGFKGKDVAVMRKAMEDYHLDITDGKNPFLRQPFHKVIVISLLKATLTCKNDCEFFQLK
KIASGDIQCYSEKELVQFFFDHVCKSLPRLVSFNGRTFDLPVLKYRAMRYGVVARNFYHSGDKWNSYNNKYSANWHTDLI
DLLSEYGVSARVKMSEVCAVLGLPGKLGIDGAQVAHMYDAGRITEIRNYCEIDVLNTYLIYLTVLRHQGTVSEESYARNL
HELMRYLERNEKDNPSYLPFLRSLKASEIVRF

Specific function: Unknown

COG id: COG3298

COG function: function code L; Predicted 3'-5' exonuclease related to the exonuclease domain of PolB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31313; Mature: 31313

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSIVVFDIETIPDTGLCEVLTGFKGKDVAVMRKAMEDYHLDITDGKNPFLRQPFHKVIV
CCCEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHH
ISLLKATLTCKNDCEFFQLKKIASGDIQCYSEKELVQFFFDHVCKSLPRLVSFNGRTFDL
HHHHHHHHCCCCCCHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCEECC
PVLKYRAMRYGVVARNFYHSGDKWNSYNNKYSANWHTDLIDLLSEYGVSARVKMSEVCAV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHH
LGLPGKLGIDGAQVAHMYDAGRITEIRNYCEIDVLNTYLIYLTVLRHQGTVSEESYARNL
HCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
HELMRYLERNEKDNPSYLPFLRSLKASEIVRF
HHHHHHHHCCCCCCCCHHHHHHHCCHHHHHCC
>Mature Secondary Structure
MDSIVVFDIETIPDTGLCEVLTGFKGKDVAVMRKAMEDYHLDITDGKNPFLRQPFHKVIV
CCCEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHH
ISLLKATLTCKNDCEFFQLKKIASGDIQCYSEKELVQFFFDHVCKSLPRLVSFNGRTFDL
HHHHHHHHCCCCCCHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCEECC
PVLKYRAMRYGVVARNFYHSGDKWNSYNNKYSANWHTDLIDLLSEYGVSARVKMSEVCAV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHH
LGLPGKLGIDGAQVAHMYDAGRITEIRNYCEIDVLNTYLIYLTVLRHQGTVSEESYARNL
HCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
HELMRYLERNEKDNPSYLPFLRSLKASEIVRF
HHHHHHHHCCCCCCCCHHHHHHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA