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The map label for this gene is 88608658

Identifier: 88608658

GI number: 88608658

Start: 700921

End: 701742

Strand: Direct

Name: 88608658

Synonym: NSE_0789

Alternate gene names: NA

Gene position: 700921-701742 (Clockwise)

Preceding gene: 88608867

Following gene: 88608051

Centisome position: 81.6

GC content: 42.46

Gene sequence:

>822_bases
ATGTTACCAACATACGAACTTAAGAGACAACTTGTATTGTCACTTGGAGATTCTGCGCACAAAGTAGCAGGAGAAGTTCT
TGAAAAGTTTTTCGGGAGAGTAGAGTCAAGATACATACGTGTCAGAACGCAAAATGCAGGCGTAATCTTAGCAGACATCT
TAGCTCCTGACACCAGTACTATCATCAAGGTCCAAATCATTTTTGAAGCGCACGCTAAACCCGTCCCGCTTGCATCAAGC
GGGCAGCACTTTGGGTTCTTGTATGACACAACAGTCTCGGTAACTCCTTCAGACACATTTTCTGCATGGATTTTATCCAG
GATTGCTTCACAGGAAGATGGATGCACCCCCGGAATAAAAAGTCGCTATGAGATAGCAATAAAAAACCTTAGTGGGCTAA
GGAGAAAATCACAGATTTTTGGAATTTTAGGCATCGTTTTTTGCGTGTACTTTATCATTGCAATAACTGCATCAATAGGT
GCCGCTCTAACCAATAATTCTTCACTAAGAAGATACGGATTGCCAACTTTTATTGCACTCACAGCTGTGTTTGCTGCTCT
ATCAATCGCCTTTGCGGTTGCAACATTTTGCATGAAAAAGGAGATAAAAAAAGCAAACACCAATTTTAGTTGCGTGCGGA
GCGAATTATTTGCACTCCATAACGTATCAGTAGGAGAGTTAGCACGATTGTGTAACCAGTATCTACAGGAAAAAGGGATG
GAAATAGAGCTAGTCAAACCGGTCATGGAATACGAAGAACCCCTAGAGGTAACAAGTGCCTTCCCTCAAGAAAGTGGAGT
GGGACACTGCAGACCCTCTTAG

Upstream 100 bases:

>100_bases
AATTATAGGAAGCAGCCGTTTCATAGTTCGTTTTGAATTAGTATATCCGACTTTGCTACTTTGTTGCCCAAGAATATGAA
TTTCGCAGCTATAAACACTG

Downstream 100 bases:

>100_bases
AGCGATAAATGTAAGAACTACCCAGTTTCAAACCTGCAAAAACACATCTTATGTTTCATAGAGCACTCTGATTCAACCTT
TTCACAGAAATTAAGACATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MLPTYELKRQLVLSLGDSAHKVAGEVLEKFFGRVESRYIRVRTQNAGVILADILAPDTSTIIKVQIIFEAHAKPVPLASS
GQHFGFLYDTTVSVTPSDTFSAWILSRIASQEDGCTPGIKSRYEIAIKNLSGLRRKSQIFGILGIVFCVYFIIAITASIG
AALTNNSSLRRYGLPTFIALTAVFAALSIAFAVATFCMKKEIKKANTNFSCVRSELFALHNVSVGELARLCNQYLQEKGM
EIELVKPVMEYEEPLEVTSAFPQESGVGHCRPS

Sequences:

>Translated_273_residues
MLPTYELKRQLVLSLGDSAHKVAGEVLEKFFGRVESRYIRVRTQNAGVILADILAPDTSTIIKVQIIFEAHAKPVPLASS
GQHFGFLYDTTVSVTPSDTFSAWILSRIASQEDGCTPGIKSRYEIAIKNLSGLRRKSQIFGILGIVFCVYFIIAITASIG
AALTNNSSLRRYGLPTFIALTAVFAALSIAFAVATFCMKKEIKKANTNFSCVRSELFALHNVSVGELARLCNQYLQEKGM
EIELVKPVMEYEEPLEVTSAFPQESGVGHCRPS
>Mature_273_residues
MLPTYELKRQLVLSLGDSAHKVAGEVLEKFFGRVESRYIRVRTQNAGVILADILAPDTSTIIKVQIIFEAHAKPVPLASS
GQHFGFLYDTTVSVTPSDTFSAWILSRIASQEDGCTPGIKSRYEIAIKNLSGLRRKSQIFGILGIVFCVYFIIAITASIG
AALTNNSSLRRYGLPTFIALTAVFAALSIAFAVATFCMKKEIKKANTNFSCVRSELFALHNVSVGELARLCNQYLQEKGM
EIELVKPVMEYEEPLEVTSAFPQESGVGHCRPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29976; Mature: 29976

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPTYELKRQLVLSLGDSAHKVAGEVLEKFFGRVESRYIRVRTQNAGVILADILAPDTST
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCC
IIKVQIIFEAHAKPVPLASSGQHFGFLYDTTVSVTPSDTFSAWILSRIASQEDGCTPGIK
EEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
SRYEIAIKNLSGLRRKSQIFGILGIVFCVYFIIAITASIGAALTNNSSLRRYGLPTFIAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHH
TAVFAALSIAFAVATFCMKKEIKKANTNFSCVRSELFALHNVSVGELARLCNQYLQEKGM
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
EIELVKPVMEYEEPLEVTSAFPQESGVGHCRPS
EEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MLPTYELKRQLVLSLGDSAHKVAGEVLEKFFGRVESRYIRVRTQNAGVILADILAPDTST
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCC
IIKVQIIFEAHAKPVPLASSGQHFGFLYDTTVSVTPSDTFSAWILSRIASQEDGCTPGIK
EEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
SRYEIAIKNLSGLRRKSQIFGILGIVFCVYFIIAITASIGAALTNNSSLRRYGLPTFIAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHH
TAVFAALSIAFAVATFCMKKEIKKANTNFSCVRSELFALHNVSVGELARLCNQYLQEKGM
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
EIELVKPVMEYEEPLEVTSAFPQESGVGHCRPS
EEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA