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The map label for this gene is 88608631

Identifier: 88608631

GI number: 88608631

Start: 262669

End: 263601

Strand: Direct

Name: 88608631

Synonym: NSE_0318

Alternate gene names: NA

Gene position: 262669-263601 (Clockwise)

Preceding gene: 88608590

Following gene: 88608850

Centisome position: 30.58

GC content: 40.51

Gene sequence:

>933_bases
ATGCATTTTTTCCAGGATAAGACTAACTTTTATTCTATTGGCGGTGAGAGGGTGAAAGCTTTCTTACAAGGGATCATTAC
CTGCAATGTTGAGACACTCGAAGATTGTGCTTATGGATTGATACTCACCCCAAAGGGGAGATTTATTTGTGACCTATTTG
TGTATAGATGTTCAACAGAAACGGAGCTTCTACTAGAAACTAACCGCTGTAATACGGAAGCCCTCTTAAGGGTGCTTGAT
CTATATAATTTCAAGAGAAGTATTGTTATCCAGGAAAAGGCTTACTTCTCATATGTAGGAATTCCTAAAGGTGCTGATGC
ATGTGCTACTCAACCTGAAGAAGCTAATCAAGACACATGCAGGGGTCCAAGAATAAAAAAGTTAACAGATGCAGTCCGTG
ATGTATGTAAGTTCCTGGAAATAGTTGAAGGAGCGAGTGAAACGAAAACACAGCTTGGGCTCATCGAGAAATGTTTGTTC
TGTGTTCGGGATCCGAGGAACAGAAAATTAGGTTTTCGAGTTGTTTTATCAAGTTCTGAATTTCCAACATCGGAAGTTTG
CCACGAAGAATATCAACGAATAAGAATCATGAGCAAAATCTCAGAAGCTGGAAAAGAGCTGAAGCCCAATACCTTTCCGT
TGGAATATGCAATGGATTACGCTTTTGATTTTAACAAGGGCTGCTACGTAGGGCAGGAAGTAATTTCCAGGTTTAGGATA
AGGGATTTTATTGAGAGAGCCTTATTCTGTCTTCAGAGTGAGGAAGGAGCAAGTATCGAAGAGGGTGATAAAATATACTT
GGGTGATGATATGGTCGGGTGTCTCAGTTCATGTTGCCAAAATTACGGTCTAGCAGTGCTACCAAAGTGTGTACTAAAGC
AGGGTGCAATCATTAAACATCAATCCGGCAAACCAGTCACAATTCTGGTGTAA

Upstream 100 bases:

>100_bases
TTGTTGTATCTATTCAGAAATAGCGATAGTTGTCATGGTAGTTTCATAGTAGATTTCAGGTGATAATCGACTATCAGGAG
CACATTTTATCTGTGAGTGA

Downstream 100 bases:

>100_bases
AGAAATGAAATCTACTTTTTTTTACTTAAAAATATGATATTATGGCAACTAAAACGCTAATATTATAATATTTTTGTTTT
AGTACTTGTAAAATTTTATC

Product: aminomethyl transferase family protein

Products: NA

Alternate protein names: Glycine Cleavage T Protein

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MHFFQDKTNFYSIGGERVKAFLQGIITCNVETLEDCAYGLILTPKGRFICDLFVYRCSTETELLLETNRCNTEALLRVLD
LYNFKRSIVIQEKAYFSYVGIPKGADACATQPEEANQDTCRGPRIKKLTDAVRDVCKFLEIVEGASETKTQLGLIEKCLF
CVRDPRNRKLGFRVVLSSSEFPTSEVCHEEYQRIRIMSKISEAGKELKPNTFPLEYAMDYAFDFNKGCYVGQEVISRFRI
RDFIERALFCLQSEEGASIEEGDKIYLGDDMVGCLSSCCQNYGLAVLPKCVLKQGAIIKHQSGKPVTILV

Sequences:

>Translated_310_residues
MHFFQDKTNFYSIGGERVKAFLQGIITCNVETLEDCAYGLILTPKGRFICDLFVYRCSTETELLLETNRCNTEALLRVLD
LYNFKRSIVIQEKAYFSYVGIPKGADACATQPEEANQDTCRGPRIKKLTDAVRDVCKFLEIVEGASETKTQLGLIEKCLF
CVRDPRNRKLGFRVVLSSSEFPTSEVCHEEYQRIRIMSKISEAGKELKPNTFPLEYAMDYAFDFNKGCYVGQEVISRFRI
RDFIERALFCLQSEEGASIEEGDKIYLGDDMVGCLSSCCQNYGLAVLPKCVLKQGAIIKHQSGKPVTILV
>Mature_310_residues
MHFFQDKTNFYSIGGERVKAFLQGIITCNVETLEDCAYGLILTPKGRFICDLFVYRCSTETELLLETNRCNTEALLRVLD
LYNFKRSIVIQEKAYFSYVGIPKGADACATQPEEANQDTCRGPRIKKLTDAVRDVCKFLEIVEGASETKTQLGLIEKCLF
CVRDPRNRKLGFRVVLSSSEFPTSEVCHEEYQRIRIMSKISEAGKELKPNTFPLEYAMDYAFDFNKGCYVGQEVISRFRI
RDFIERALFCLQSEEGASIEEGDKIYLGDDMVGCLSSCCQNYGLAVLPKCVLKQGAIIKHQSGKPVTILV

Specific function: Unknown

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35095; Mature: 35095

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFFQDKTNFYSIGGERVKAFLQGIITCNVETLEDCAYGLILTPKGRFICDLFVYRCSTE
CCCCCCCCCEEECCHHHHHHHHHHHHHCCHHHHHHCCCCEEECCCCCEEHHHHHHHCCCC
TELLLETNRCNTEALLRVLDLYNFKRSIVIQEKAYFSYVGIPKGADACATQPEEANQDTC
CEEEEECCCCCHHHHHHHHHHHCCHHHEEEEEHHHEEEECCCCCCCHHCCCCCCCCCCCC
RGPRIKKLTDAVRDVCKFLEIVEGASETKTQLGLIEKCLFCVRDPRNRKLGFRVVLSSSE
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC
FPTSEVCHEEYQRIRIMSKISEAGKELKPNTFPLEYAMDYAFDFNKGCYVGQEVISRFRI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEECCCCCHHHHHHHHHHHH
RDFIERALFCLQSEEGASIEEGDKIYLGDDMVGCLSSCCQNYGLAVLPKCVLKQGAIIKH
HHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEE
QSGKPVTILV
CCCCCEEEEC
>Mature Secondary Structure
MHFFQDKTNFYSIGGERVKAFLQGIITCNVETLEDCAYGLILTPKGRFICDLFVYRCSTE
CCCCCCCCCEEECCHHHHHHHHHHHHHCCHHHHHHCCCCEEECCCCCEEHHHHHHHCCCC
TELLLETNRCNTEALLRVLDLYNFKRSIVIQEKAYFSYVGIPKGADACATQPEEANQDTC
CEEEEECCCCCHHHHHHHHHHHCCHHHEEEEEHHHEEEECCCCCCCHHCCCCCCCCCCCC
RGPRIKKLTDAVRDVCKFLEIVEGASETKTQLGLIEKCLFCVRDPRNRKLGFRVVLSSSE
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC
FPTSEVCHEEYQRIRIMSKISEAGKELKPNTFPLEYAMDYAFDFNKGCYVGQEVISRFRI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEECCCCCHHHHHHHHHHHH
RDFIERALFCLQSEEGASIEEGDKIYLGDDMVGCLSSCCQNYGLAVLPKCVLKQGAIIKH
HHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEE
QSGKPVTILV
CCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA