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The map label for this gene is yajC

Identifier: 88608850

GI number: 88608850

Start: 263902

End: 264204

Strand: Direct

Name: yajC

Synonym: NSE_0319

Alternate gene names: 88608850

Gene position: 263902-264204 (Clockwise)

Preceding gene: 88608631

Following gene: 88608435

Centisome position: 30.72

GC content: 37.62

Gene sequence:

>303_bases
ATGTCTTTTTCGCAGATCTTTACCAGTACTAGCACGGGTTCTGATTCTATATTAATGAGTTTGCTCCCTCTGGGTATTGT
TTTTTTTGTGTTCTACGTATTTGTAATACGTCCGCAAAGCAAAAAGATGAGGGAGCATCAGAATATGCTTAAAGCATTAA
AAGTTGGAGATCCCGTTATTACGGCTAGTGGAATCAGCGGGACAGTTGCAAGGATAGATGACAAAAATGATATGGTACAT
CTTCAGGTAGCTGAAGGGGTGATAGTCAAAATTTTAAAGAATTTTATTTCAGAGAAGAGATAG

Upstream 100 bases:

>100_bases
GCTTATCGGTCATTGATGGTACATTCTTCATGTTTCCTAATCTAGGCAGAAAAGGTGAGTGGGGTGTGCTATATTCTGAT
TGTTTGGTTTGGATATTTTT

Downstream 100 bases:

>100_bases
GGGTATATTGGAATAATGACGAGAGTAAGTATTAATTTGGATAAGGTTGCGCTCCTTAGAAATTCAAGAAGTGCTGGAAG
TCCCGATATCAAATATGTTG

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MSFSQIFTSTSTGSDSILMSLLPLGIVFFVFYVFVIRPQSKKMREHQNMLKALKVGDPVITASGISGTVARIDDKNDMVH
LQVAEGVIVKILKNFISEKR

Sequences:

>Translated_100_residues
MSFSQIFTSTSTGSDSILMSLLPLGIVFFVFYVFVIRPQSKKMREHQNMLKALKVGDPVITASGISGTVARIDDKNDMVH
LQVAEGVIVKILKNFISEKR
>Mature_99_residues
SFSQIFTSTSTGSDSILMSLLPLGIVFFVFYVFVIRPQSKKMREHQNMLKALKVGDPVITASGISGTVARIDDKNDMVHL
QVAEGVIVKILKNFISEKR

Specific function: Not known; elicits an immunogenic response in mice [H]

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 11118; Mature: 10987

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSQIFTSTSTGSDSILMSLLPLGIVFFVFYVFVIRPQSKKMREHQNMLKALKVGDPVI
CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEE
TASGISGTVARIDDKNDMVHLQVAEGVIVKILKNFISEKR
EECCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFSQIFTSTSTGSDSILMSLLPLGIVFFVFYVFVIRPQSKKMREHQNMLKALKVGDPVI
CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEE
TASGISGTVARIDDKNDMVHLQVAEGVIVKILKNFISEKR
EECCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9826342 [H]