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The map label for this gene is bepC [H]

Identifier: 88608600

GI number: 88608600

Start: 708928

End: 710238

Strand: Direct

Name: bepC [H]

Synonym: NSE_0798

Alternate gene names: 88608600

Gene position: 708928-710238 (Clockwise)

Preceding gene: 88608418

Following gene: 88608698

Centisome position: 82.53

GC content: 41.88

Gene sequence:

>1311_bases
ATGCGCTTTTTGATTCTCTTGCTGTTGTGGTTTACATCTGTGGATTTTGCATACTCTTACAGCCTGGAAGATGCATTTCA
CGACACCCTGCTCAATAATGATACAGTAAAATCGTTATCCCAACAGCACGAGCTAGCATTTCTGGGAAGAAGAATGGCTG
TTTCAGAACTCCTTCCAACAGCCTCACTTGGATTACTACATGATTTTGACAGAGAGTTTTGGGCACCCGTAGGAAGCGCT
AAAACAAATCCTGTAATCTGGCTGACTGTGACACAGAGTATTAGTAATCCCTTTGCACCACTGTCTAAGTTATTCCTAGC
AAAACATGAGTATCTCAATGCGACCTTCCTATACGCCGATGCTATCCACAATGTTATGTTGCATGTCATGCATGCCTACC
TGGAAGCAATCAAAACTGAAGAGGTTCTTGCACTGCACAAAGAAACCGTGCGCGCACTGGAGATAAATCTAGATGCAGTG
CAAAAGTCGTTGAAATTGGGCGAAAGTACAAAGGGAGAGCTAGCATATGCAAAAGCCAAACTCTTATCGGCACGATCTCA
GTTTCTGGAAAGTAAAAGTAAAGCCGAAAGTAGTAGAGCTTCTCTCTGCCACCTAGTTGGAAGAAAAAGCATACAAACAA
AGCTCGAAGACCCTATCTTGAAGGTGGAATATCTGCCACAGACTCTACAGGAGTGTGTTATTCTTGCATTTGCAAATAAC
GCTCCTATAAAAGCGGCAAGGAACGCCATAGAATCGGCAAAATTGAAAATAGTAGAAAGTGTGGGAAGGTGGCTTCCTGC
AATGAGCCTCGAGGCAAAATTACATTATGTGCCCGCTAAAAAAAGCATATCTGGTGGGTTTCGTAATATTAGTACACAAA
CAACAATGAGTATCAGTCTACCGCTCTTCACAGGAGGCAGAGACACTCTAGCCGTAGCAATGGCGTATGAAGACAAGTCT
CTTAAGGAACACGAATATCACGCAAAAAGTAAACTTCTAGAGGAAGAAGTACGAAATACATGGAATGATTACCACAATGC
CTTACTTTTCGCCTCTGCATTAAAAGAACTTGTCAAAGCAAGCAATATTGCCGTTGATAGTATCAGACAAGAAGCACATC
TTAATCTTAAAAGCAATCTAAACGTGATAGATGCTGAGTTGGAGTTACTAAAGTTCAAGACGCAACTCAGGCAGGCAGAA
GCCGCAAAGGTAGGTGCATTTTACAAACTTCTTTTTATGATATACGGAAACGAGACACTAGACATGTTGCTTAGGGAAGA
TTTCAACGCATCCACACAACAAAAATCATGA

Upstream 100 bases:

>100_bases
GTAGTATTCAAATTCTGAAAGCATCACAGATTCTCGTGATGATATTTTGAAATGTAGGTTTATAGGTGCTACCATTGCAC
TTTGTCCCTTGCATGCGAAA

Downstream 100 bases:

>100_bases
CTTCCGTAAAAGTAGATCCGGTCTCACTTTATCAAACGCACTAGTCTTAATGTATTCTAAGATAGTCCGCTTTGATGCCC
AACGAGGTCCTTCACTTAAC

Product: outer membrane efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MRFLILLLLWFTSVDFAYSYSLEDAFHDTLLNNDTVKSLSQQHELAFLGRRMAVSELLPTASLGLLHDFDREFWAPVGSA
KTNPVIWLTVTQSISNPFAPLSKLFLAKHEYLNATFLYADAIHNVMLHVMHAYLEAIKTEEVLALHKETVRALEINLDAV
QKSLKLGESTKGELAYAKAKLLSARSQFLESKSKAESSRASLCHLVGRKSIQTKLEDPILKVEYLPQTLQECVILAFANN
APIKAARNAIESAKLKIVESVGRWLPAMSLEAKLHYVPAKKSISGGFRNISTQTTMSISLPLFTGGRDTLAVAMAYEDKS
LKEHEYHAKSKLLEEEVRNTWNDYHNALLFASALKELVKASNIAVDSIRQEAHLNLKSNLNVIDAELELLKFKTQLRQAE
AAKVGAFYKLLFMIYGNETLDMLLREDFNASTQQKS

Sequences:

>Translated_436_residues
MRFLILLLLWFTSVDFAYSYSLEDAFHDTLLNNDTVKSLSQQHELAFLGRRMAVSELLPTASLGLLHDFDREFWAPVGSA
KTNPVIWLTVTQSISNPFAPLSKLFLAKHEYLNATFLYADAIHNVMLHVMHAYLEAIKTEEVLALHKETVRALEINLDAV
QKSLKLGESTKGELAYAKAKLLSARSQFLESKSKAESSRASLCHLVGRKSIQTKLEDPILKVEYLPQTLQECVILAFANN
APIKAARNAIESAKLKIVESVGRWLPAMSLEAKLHYVPAKKSISGGFRNISTQTTMSISLPLFTGGRDTLAVAMAYEDKS
LKEHEYHAKSKLLEEEVRNTWNDYHNALLFASALKELVKASNIAVDSIRQEAHLNLKSNLNVIDAELELLKFKTQLRQAE
AAKVGAFYKLLFMIYGNETLDMLLREDFNASTQQKS
>Mature_436_residues
MRFLILLLLWFTSVDFAYSYSLEDAFHDTLLNNDTVKSLSQQHELAFLGRRMAVSELLPTASLGLLHDFDREFWAPVGSA
KTNPVIWLTVTQSISNPFAPLSKLFLAKHEYLNATFLYADAIHNVMLHVMHAYLEAIKTEEVLALHKETVRALEINLDAV
QKSLKLGESTKGELAYAKAKLLSARSQFLESKSKAESSRASLCHLVGRKSIQTKLEDPILKVEYLPQTLQECVILAFANN
APIKAARNAIESAKLKIVESVGRWLPAMSLEAKLHYVPAKKSISGGFRNISTQTTMSISLPLFTGGRDTLAVAMAYEDKS
LKEHEYHAKSKLLEEEVRNTWNDYHNALLFASALKELVKASNIAVDSIRQEAHLNLKSNLNVIDAELELLKFKTQLRQAE
AAKVGAFYKLLFMIYGNETLDMLLREDFNASTQQKS

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 48960; Mature: 48960

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLILLLLWFTSVDFAYSYSLEDAFHDTLLNNDTVKSLSQQHELAFLGRRMAVSELLPT
CHHHHHHHHHHHHHHHHEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
ASLGLLHDFDREFWAPVGSAKTNPVIWLTVTQSISNPFAPLSKLFLAKHEYLNATFLYAD
HHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHHH
AIHNVMLHVMHAYLEAIKTEEVLALHKETVRALEINLDAVQKSLKLGESTKGELAYAKAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHH
LLSARSQFLESKSKAESSRASLCHLVGRKSIQTKLEDPILKVEYLPQTLQECVILAFANN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEECCC
APIKAARNAIESAKLKIVESVGRWLPAMSLEAKLHYVPAKKSISGGFRNISTQTTMSISL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHCCCCCCCCCCEEEEEEE
PLFTGGRDTLAVAMAYEDKSLKEHEYHAKSKLLEEEVRNTWNDYHNALLFASALKELVKA
EEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNIAVDSIRQEAHLNLKSNLNVIDAELELLKFKTQLRQAEAAKVGAFYKLLFMIYGNETL
HCHHHHHHHHHHCCCHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
DMLLREDFNASTQQKS
HHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRFLILLLLWFTSVDFAYSYSLEDAFHDTLLNNDTVKSLSQQHELAFLGRRMAVSELLPT
CHHHHHHHHHHHHHHHHEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
ASLGLLHDFDREFWAPVGSAKTNPVIWLTVTQSISNPFAPLSKLFLAKHEYLNATFLYAD
HHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHHH
AIHNVMLHVMHAYLEAIKTEEVLALHKETVRALEINLDAVQKSLKLGESTKGELAYAKAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHH
LLSARSQFLESKSKAESSRASLCHLVGRKSIQTKLEDPILKVEYLPQTLQECVILAFANN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEECCC
APIKAARNAIESAKLKIVESVGRWLPAMSLEAKLHYVPAKKSISGGFRNISTQTTMSISL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHCCCCCCCCCCEEEEEEE
PLFTGGRDTLAVAMAYEDKSLKEHEYHAKSKLLEEEVRNTWNDYHNALLFASALKELVKA
EEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNIAVDSIRQEAHLNLKSNLNVIDAELELLKFKTQLRQAEAAKVGAFYKLLFMIYGNETL
HCHHHHHHHHHHCCCHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
DMLLREDFNASTQQKS
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]