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The map label for this gene is 88608599

Identifier: 88608599

GI number: 88608599

Start: 288093

End: 288503

Strand: Reverse

Name: 88608599

Synonym: NSE_0349

Alternate gene names: NA

Gene position: 288503-288093 (Counterclockwise)

Preceding gene: 88608432

Following gene: 88608414

Centisome position: 33.59

GC content: 42.58

Gene sequence:

>411_bases
GTGGAGGCGCTTCATATCATTGTTGTGACAATGTGGATGGCAGGCCTTTTTTACTTACCCAGAATCATGGTCTATCATGC
TGAAGTGGATGTTGGTACTGAAACTGATTCTGTTTTTCGTGTGATGGAAAGACGTCTGCTCCGCTATATTATGACACCTG
CTATGGTGGTAAGTATTGTCCTTGGGTTGCTGTTAGCAATCGATACAGGTCACATTCTGAGTACATGGCTACATCTAAAG
TTACTTTTCGTGGCTGCATTGGTGTCTTTACACATATTCTTTTGGCGATGTTCTGTTGCCTTTGGTAGAGGGTGTAATAG
GTACTCGAGCACGTTTTTTAAGTTTGCAAACGAGGGAGTCACAATTGCCTTTATCGCAATTGTGATACTGGCCGTGACAA
AACCTTTTTGA

Upstream 100 bases:

>100_bases
CCTAAGTGATGACTCTGAGGAGGTATCAAAACATCCCGTACCGATTGAATTTATCAAATACTATAACGTTTAGGGTCGTA
TGAGTATTGGCACCGATTGG

Downstream 100 bases:

>100_bases
TGTTCTTCAAGCGCCGCGCACACCTTTTTAGATGGTTGTTCGTGATCGATGTAGTACCTTCCCTGTCTGAAATTGTATTT
GTCTTGAAACAACTGCCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MEALHIIVVTMWMAGLFYLPRIMVYHAEVDVGTETDSVFRVMERRLLRYIMTPAMVVSIVLGLLLAIDTGHILSTWLHLK
LLFVAALVSLHIFFWRCSVAFGRGCNRYSSTFFKFANEGVTIAFIAIVILAVTKPF

Sequences:

>Translated_136_residues
MEALHIIVVTMWMAGLFYLPRIMVYHAEVDVGTETDSVFRVMERRLLRYIMTPAMVVSIVLGLLLAIDTGHILSTWLHLK
LLFVAALVSLHIFFWRCSVAFGRGCNRYSSTFFKFANEGVTIAFIAIVILAVTKPF
>Mature_136_residues
MEALHIIVVTMWMAGLFYLPRIMVYHAEVDVGTETDSVFRVMERRLLRYIMTPAMVVSIVLGLLLAIDTGHILSTWLHLK
LLFVAALVSLHIFFWRCSVAFGRGCNRYSSTFFKFANEGVTIAFIAIVILAVTKPF

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR005265 [H]

Pfam domain/function: PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 15443; Mature: 15443

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEALHIIVVTMWMAGLFYLPRIMVYHAEVDVGTETDSVFRVMERRLLRYIMTPAMVVSIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLLLAIDTGHILSTWLHLKLLFVAALVSLHIFFWRCSVAFGRGCNRYSSTFFKFANEGV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCH
TIAFIAIVILAVTKPF
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEALHIIVVTMWMAGLFYLPRIMVYHAEVDVGTETDSVFRVMERRLLRYIMTPAMVVSIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLLLAIDTGHILSTWLHLKLLFVAALVSLHIFFWRCSVAFGRGCNRYSSTFFKFANEGV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCH
TIAFIAIVILAVTKPF
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]