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The map label for this gene is 88608414

Identifier: 88608414

GI number: 88608414

Start: 287515

End: 288096

Strand: Reverse

Name: 88608414

Synonym: NSE_0348

Alternate gene names: NA

Gene position: 288096-287515 (Counterclockwise)

Preceding gene: 88608599

Following gene: 88608076

Centisome position: 33.54

GC content: 41.92

Gene sequence:

>582_bases
TTGATGTTCTTCAAGCGCCGCGCACACCTTTTTAGATGGTTGTTCGTGATCGATGTAGTACCTTCCCTGTCTGAAATTGT
ATTTGTCTTGAAACAACTGCCTCTGGGAAGTCTCGTTGTGCTGCGGTGTTACGAGCATTTACAAAGGAAAAACTTGGCAC
ACTGGCTTTCAAGAATGTGTAGGAAGTTGCGTTTGATTTTTCTCGTTGCTGGCGACCCTTTTATTGCACTTGTAACGCGT
GCCTCAGGACTACACGTGAGGGAGTCAACTTTCAGTAAGATGAGAAAGTGGCGGTACTTCAAAAAGCGGTGGTTTATAAG
TTGTGCGTCGCACAGTGTAAAACAAAACCTCAAAATACAAGCAGCTGGTTTTGATGCAGCACTTTTCTCACCAGTTTTTC
GTAGCAAGAAAACTAACTTTAAGGCAATGGGAGCAACAAAATTCCTTAAATACCAAGCTTTCACAAGAAAAATCGGTGTT
TTTGCATTAGGAGGCACAACAAGAGCAAATATATGGAAACTGAGAGAAGCTAGGCAAAAAGTTGGTATTGCGGGAATTAA
TTTGTATAATGACCGTCTGTGA

Upstream 100 bases:

>100_bases
GAGGGTGTAATAGGTACTCGAGCACGTTTTTTAAGTTTGCAAACGAGGGAGTCACAATTGCCTTTATCGCAATTGTGATA
CTGGCCGTGACAAAACCTTT

Downstream 100 bases:

>100_bases
GCTTGAATACAAAATTCTAGCACCCATATATCACGTAAGGAAATGCATTTTTTATGTCAGAAGAAGAGCTGAATAATCGT
GACACAGAGTCAAAGCAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MMFFKRRAHLFRWLFVIDVVPSLSEIVFVLKQLPLGSLVVLRCYEHLQRKNLAHWLSRMCRKLRLIFLVAGDPFIALVTR
ASGLHVRESTFSKMRKWRYFKKRWFISCASHSVKQNLKIQAAGFDAALFSPVFRSKKTNFKAMGATKFLKYQAFTRKIGV
FALGGTTRANIWKLREARQKVGIAGINLYNDRL

Sequences:

>Translated_193_residues
MMFFKRRAHLFRWLFVIDVVPSLSEIVFVLKQLPLGSLVVLRCYEHLQRKNLAHWLSRMCRKLRLIFLVAGDPFIALVTR
ASGLHVRESTFSKMRKWRYFKKRWFISCASHSVKQNLKIQAAGFDAALFSPVFRSKKTNFKAMGATKFLKYQAFTRKIGV
FALGGTTRANIWKLREARQKVGIAGINLYNDRL
>Mature_193_residues
MMFFKRRAHLFRWLFVIDVVPSLSEIVFVLKQLPLGSLVVLRCYEHLQRKNLAHWLSRMCRKLRLIFLVAGDPFIALVTR
ASGLHVRESTFSKMRKWRYFKKRWFISCASHSVKQNLKIQAAGFDAALFSPVFRSKKTNFKAMGATKFLKYQAFTRKIGV
FALGGTTRANIWKLREARQKVGIAGINLYNDRL

Specific function: Unknown

COG id: COG0352

COG function: function code H; Thiamine monophosphate synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22502; Mature: 22502

Theoretical pI: Translated: 11.96; Mature: 11.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFFKRRAHLFRWLFVIDVVPSLSEIVFVLKQLPLGSLVVLRCYEHLQRKNLAHWLSRMC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHH
RKLRLIFLVAGDPFIALVTRASGLHVRESTFSKMRKWRYFKKRWFISCASHSVKQNLKIQ
HHHHEEEEECCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
AAGFDAALFSPVFRSKKTNFKAMGATKFLKYQAFTRKIGVFALGGTTRANIWKLREARQK
ECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHH
VGIAGINLYNDRL
HCCCCEEECCCCC
>Mature Secondary Structure
MMFFKRRAHLFRWLFVIDVVPSLSEIVFVLKQLPLGSLVVLRCYEHLQRKNLAHWLSRMC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHH
RKLRLIFLVAGDPFIALVTRASGLHVRESTFSKMRKWRYFKKRWFISCASHSVKQNLKIQ
HHHHEEEEECCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
AAGFDAALFSPVFRSKKTNFKAMGATKFLKYQAFTRKIGVFALGGTTRANIWKLREARQK
ECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHH
VGIAGINLYNDRL
HCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA