Definition Neorickettsia sennetsu str. Miyayama chromosome, complete genome.
Accession NC_007798
Length 859,006

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The map label for this gene is sphX [H]

Identifier: 88608594

GI number: 88608594

Start: 55094

End: 56110

Strand: Direct

Name: sphX [H]

Synonym: NSE_0063

Alternate gene names: 88608594

Gene position: 55094-56110 (Clockwise)

Preceding gene: 88608109

Following gene: 88608332

Centisome position: 6.41

GC content: 42.38

Gene sequence:

>1017_bases
ATGGCGCGGATTTTTCTATACCTGTTTTTGCTATTCTTCGCTGGTTTTGCTGATACCAGAGAGTATGTGAGAGTCGTAGG
TTCGAGTACGGTCTTCCCATTCATGAGTGCGATTTCTGAGGAGTTTGCTAAGACCTATAGGGTCAAGACTCCTATAGTCG
AGTCCACTGGTACAAGCGCCGGATTTAAGCTCTTTTGTATGGGTGTGGGTGATGCTCATCCCGACATAGTTGTATCCTCA
CGCAGGATAAATGAAGTGGAGTTGGCACTTTGTAAGGTGTACTCAATTGATAGTGGAGATATAATGGAAATTGAGCTTGG
TAGGGACGCTCTCGTGGTTGCTAGTAGTAGTGGTAGTGGTCTTGATTATGAATTCTCCATCCGTGACATTTTTGAAGCCA
TCTCATTCTATGTAGCAGATGGAGTTAGGCTTGTTAAAAATCCCAACAAGCGATGGGGTAGTATAGATGATGGTAAATTC
TATGACTCTGAGATTAAGATTTACGGTCCCACAAGGAATACTGGTACGTTCGAGTCAGTAAAAAGGATGGTCCTACTCAG
CCAGTGTCTAAATGAACCTGCCTTTAATCTGGCGTATGGGCTGGAAAAATTAAGAAAGATTTGTTCAGTTGTTCGGGATG
ATGGTGTTTATGTGGAAGTCAGCAATAATGAAAACTTGATGGTCCAAAAACTTGCACGTAATCACAATGCATTTGGTCTT
CTGAGCTACAGTTTCTTTATAAGAAATTCTGATGCACTAAAGGCGCATTCTGTGAATGGAGTGCGACCAACTTATGAAAG
CATAATGAGTGGTCAATACGATTTTGTTCGTCCAGTATACTTGTACGTAAAGCTTACGCACCTTGATTTTGTTCGTGGTC
TTAGGGACCTACTCAATGAAGTTCTTAGTGAGAATGCACTGGGAACATACGGCTACCTAAGGGCTGTTGGTATGGTTCCG
ATGCCAAATCAGGAGCTAGGTGTCATTAGAGAAAAGGTTGCATCTTTGTCTTCTTGA

Upstream 100 bases:

>100_bases
TCTAGTGTGCGAACAGGCTCAGTCTTTTTTGGAATGCGAGTATCGCTCCGGTTTTTACAGTAGAGTGGGGCTGGTTTGTT
GGAGTGTCTTTTTGATTTGA

Downstream 100 bases:

>100_bases
GTTAGTTTGTGAATCGTTTTTTGCACGTGGTTTTGATCACGTTTGTCGTCTTCGTAGCAGATGTCGCAGTGGAAATTTAT
GTTCCTGCGCTGCCAAGTAT

Product: putative phosphate ABC transporter periplasmic phosphate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MARIFLYLFLLFFAGFADTREYVRVVGSSTVFPFMSAISEEFAKTYRVKTPIVESTGTSAGFKLFCMGVGDAHPDIVVSS
RRINEVELALCKVYSIDSGDIMEIELGRDALVVASSSGSGLDYEFSIRDIFEAISFYVADGVRLVKNPNKRWGSIDDGKF
YDSEIKIYGPTRNTGTFESVKRMVLLSQCLNEPAFNLAYGLEKLRKICSVVRDDGVYVEVSNNENLMVQKLARNHNAFGL
LSYSFFIRNSDALKAHSVNGVRPTYESIMSGQYDFVRPVYLYVKLTHLDFVRGLRDLLNEVLSENALGTYGYLRAVGMVP
MPNQELGVIREKVASLSS

Sequences:

>Translated_338_residues
MARIFLYLFLLFFAGFADTREYVRVVGSSTVFPFMSAISEEFAKTYRVKTPIVESTGTSAGFKLFCMGVGDAHPDIVVSS
RRINEVELALCKVYSIDSGDIMEIELGRDALVVASSSGSGLDYEFSIRDIFEAISFYVADGVRLVKNPNKRWGSIDDGKF
YDSEIKIYGPTRNTGTFESVKRMVLLSQCLNEPAFNLAYGLEKLRKICSVVRDDGVYVEVSNNENLMVQKLARNHNAFGL
LSYSFFIRNSDALKAHSVNGVRPTYESIMSGQYDFVRPVYLYVKLTHLDFVRGLRDLLNEVLSENALGTYGYLRAVGMVP
MPNQELGVIREKVASLSS
>Mature_337_residues
ARIFLYLFLLFFAGFADTREYVRVVGSSTVFPFMSAISEEFAKTYRVKTPIVESTGTSAGFKLFCMGVGDAHPDIVVSSR
RINEVELALCKVYSIDSGDIMEIELGRDALVVASSSGSGLDYEFSIRDIFEAISFYVADGVRLVKNPNKRWGSIDDGKFY
DSEIKIYGPTRNTGTFESVKRMVLLSQCLNEPAFNLAYGLEKLRKICSVVRDDGVYVEVSNNENLMVQKLARNHNAFGLL
SYSFFIRNSDALKAHSVNGVRPTYESIMSGQYDFVRPVYLYVKLTHLDFVRGLRDLLNEVLSENALGTYGYLRAVGMVPM
PNQELGVIREKVASLSS

Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pstS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011862 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37822; Mature: 37691

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIFLYLFLLFFAGFADTREYVRVVGSSTVFPFMSAISEEFAKTYRVKTPIVESTGTSA
CHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GFKLFCMGVGDAHPDIVVSSRRINEVELALCKVYSIDSGDIMEIELGRDALVVASSSGSG
CEEEEEEECCCCCCCEEEECCCCCHHHEEEEHEEECCCCCEEEEEECCCEEEEEECCCCC
LDYEFSIRDIFEAISFYVADGVRLVKNPNKRWGSIDDGKFYDSEIKIYGPTRNTGTFESV
CEEEEEHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEECCEEEEECCCCCCCCHHHH
KRMVLLSQCLNEPAFNLAYGLEKLRKICSVVRDDGVYVEVSNNENLMVQKLARNHNAFGL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCEEE
LSYSFFIRNSDALKAHSVNGVRPTYESIMSGQYDFVRPVYLYVKLTHLDFVRGLRDLLNE
EEEEEEEECCCCCEECCCCCCCHHHHHHHCCCCHHHCEEEEEEEHHHHHHHHHHHHHHHH
VLSENALGTYGYLRAVGMVPMPNQELGVIREKVASLSS
HHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARIFLYLFLLFFAGFADTREYVRVVGSSTVFPFMSAISEEFAKTYRVKTPIVESTGTSA
HHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GFKLFCMGVGDAHPDIVVSSRRINEVELALCKVYSIDSGDIMEIELGRDALVVASSSGSG
CEEEEEEECCCCCCCEEEECCCCCHHHEEEEHEEECCCCCEEEEEECCCEEEEEECCCCC
LDYEFSIRDIFEAISFYVADGVRLVKNPNKRWGSIDDGKFYDSEIKIYGPTRNTGTFESV
CEEEEEHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEECCEEEEECCCCCCCCHHHH
KRMVLLSQCLNEPAFNLAYGLEKLRKICSVVRDDGVYVEVSNNENLMVQKLARNHNAFGL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCEEE
LSYSFFIRNSDALKAHSVNGVRPTYESIMSGQYDFVRPVYLYVKLTHLDFVRGLRDLLNE
EEEEEEEECCCCCEECCCCCCCHHHHHHHCCCCHHHCEEEEEEEHHHHHHHHHHHHHHHH
VLSENALGTYGYLRAVGMVPMPNQELGVIREKVASLSS
HHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]