| Definition | Neorickettsia sennetsu str. Miyayama chromosome, complete genome. |
|---|---|
| Accession | NC_007798 |
| Length | 859,006 |
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The map label for this gene is sphX [H]
Identifier: 88608594
GI number: 88608594
Start: 55094
End: 56110
Strand: Direct
Name: sphX [H]
Synonym: NSE_0063
Alternate gene names: 88608594
Gene position: 55094-56110 (Clockwise)
Preceding gene: 88608109
Following gene: 88608332
Centisome position: 6.41
GC content: 42.38
Gene sequence:
>1017_bases ATGGCGCGGATTTTTCTATACCTGTTTTTGCTATTCTTCGCTGGTTTTGCTGATACCAGAGAGTATGTGAGAGTCGTAGG TTCGAGTACGGTCTTCCCATTCATGAGTGCGATTTCTGAGGAGTTTGCTAAGACCTATAGGGTCAAGACTCCTATAGTCG AGTCCACTGGTACAAGCGCCGGATTTAAGCTCTTTTGTATGGGTGTGGGTGATGCTCATCCCGACATAGTTGTATCCTCA CGCAGGATAAATGAAGTGGAGTTGGCACTTTGTAAGGTGTACTCAATTGATAGTGGAGATATAATGGAAATTGAGCTTGG TAGGGACGCTCTCGTGGTTGCTAGTAGTAGTGGTAGTGGTCTTGATTATGAATTCTCCATCCGTGACATTTTTGAAGCCA TCTCATTCTATGTAGCAGATGGAGTTAGGCTTGTTAAAAATCCCAACAAGCGATGGGGTAGTATAGATGATGGTAAATTC TATGACTCTGAGATTAAGATTTACGGTCCCACAAGGAATACTGGTACGTTCGAGTCAGTAAAAAGGATGGTCCTACTCAG CCAGTGTCTAAATGAACCTGCCTTTAATCTGGCGTATGGGCTGGAAAAATTAAGAAAGATTTGTTCAGTTGTTCGGGATG ATGGTGTTTATGTGGAAGTCAGCAATAATGAAAACTTGATGGTCCAAAAACTTGCACGTAATCACAATGCATTTGGTCTT CTGAGCTACAGTTTCTTTATAAGAAATTCTGATGCACTAAAGGCGCATTCTGTGAATGGAGTGCGACCAACTTATGAAAG CATAATGAGTGGTCAATACGATTTTGTTCGTCCAGTATACTTGTACGTAAAGCTTACGCACCTTGATTTTGTTCGTGGTC TTAGGGACCTACTCAATGAAGTTCTTAGTGAGAATGCACTGGGAACATACGGCTACCTAAGGGCTGTTGGTATGGTTCCG ATGCCAAATCAGGAGCTAGGTGTCATTAGAGAAAAGGTTGCATCTTTGTCTTCTTGA
Upstream 100 bases:
>100_bases TCTAGTGTGCGAACAGGCTCAGTCTTTTTTGGAATGCGAGTATCGCTCCGGTTTTTACAGTAGAGTGGGGCTGGTTTGTT GGAGTGTCTTTTTGATTTGA
Downstream 100 bases:
>100_bases GTTAGTTTGTGAATCGTTTTTTGCACGTGGTTTTGATCACGTTTGTCGTCTTCGTAGCAGATGTCGCAGTGGAAATTTAT GTTCCTGCGCTGCCAAGTAT
Product: putative phosphate ABC transporter periplasmic phosphate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MARIFLYLFLLFFAGFADTREYVRVVGSSTVFPFMSAISEEFAKTYRVKTPIVESTGTSAGFKLFCMGVGDAHPDIVVSS RRINEVELALCKVYSIDSGDIMEIELGRDALVVASSSGSGLDYEFSIRDIFEAISFYVADGVRLVKNPNKRWGSIDDGKF YDSEIKIYGPTRNTGTFESVKRMVLLSQCLNEPAFNLAYGLEKLRKICSVVRDDGVYVEVSNNENLMVQKLARNHNAFGL LSYSFFIRNSDALKAHSVNGVRPTYESIMSGQYDFVRPVYLYVKLTHLDFVRGLRDLLNEVLSENALGTYGYLRAVGMVP MPNQELGVIREKVASLSS
Sequences:
>Translated_338_residues MARIFLYLFLLFFAGFADTREYVRVVGSSTVFPFMSAISEEFAKTYRVKTPIVESTGTSAGFKLFCMGVGDAHPDIVVSS RRINEVELALCKVYSIDSGDIMEIELGRDALVVASSSGSGLDYEFSIRDIFEAISFYVADGVRLVKNPNKRWGSIDDGKF YDSEIKIYGPTRNTGTFESVKRMVLLSQCLNEPAFNLAYGLEKLRKICSVVRDDGVYVEVSNNENLMVQKLARNHNAFGL LSYSFFIRNSDALKAHSVNGVRPTYESIMSGQYDFVRPVYLYVKLTHLDFVRGLRDLLNEVLSENALGTYGYLRAVGMVP MPNQELGVIREKVASLSS >Mature_337_residues ARIFLYLFLLFFAGFADTREYVRVVGSSTVFPFMSAISEEFAKTYRVKTPIVESTGTSAGFKLFCMGVGDAHPDIVVSSR RINEVELALCKVYSIDSGDIMEIELGRDALVVASSSGSGLDYEFSIRDIFEAISFYVADGVRLVKNPNKRWGSIDDGKFY DSEIKIYGPTRNTGTFESVKRMVLLSQCLNEPAFNLAYGLEKLRKICSVVRDDGVYVEVSNNENLMVQKLARNHNAFGLL SYSFFIRNSDALKAHSVNGVRPTYESIMSGQYDFVRPVYLYVKLTHLDFVRGLRDLLNEVLSENALGTYGYLRAVGMVPM PNQELGVIREKVASLSS
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37822; Mature: 37691
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIFLYLFLLFFAGFADTREYVRVVGSSTVFPFMSAISEEFAKTYRVKTPIVESTGTSA CHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GFKLFCMGVGDAHPDIVVSSRRINEVELALCKVYSIDSGDIMEIELGRDALVVASSSGSG CEEEEEEECCCCCCCEEEECCCCCHHHEEEEHEEECCCCCEEEEEECCCEEEEEECCCCC LDYEFSIRDIFEAISFYVADGVRLVKNPNKRWGSIDDGKFYDSEIKIYGPTRNTGTFESV CEEEEEHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEECCEEEEECCCCCCCCHHHH KRMVLLSQCLNEPAFNLAYGLEKLRKICSVVRDDGVYVEVSNNENLMVQKLARNHNAFGL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCEEE LSYSFFIRNSDALKAHSVNGVRPTYESIMSGQYDFVRPVYLYVKLTHLDFVRGLRDLLNE EEEEEEEECCCCCEECCCCCCCHHHHHHHCCCCHHHCEEEEEEEHHHHHHHHHHHHHHHH VLSENALGTYGYLRAVGMVPMPNQELGVIREKVASLSS HHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure ARIFLYLFLLFFAGFADTREYVRVVGSSTVFPFMSAISEEFAKTYRVKTPIVESTGTSA HHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GFKLFCMGVGDAHPDIVVSSRRINEVELALCKVYSIDSGDIMEIELGRDALVVASSSGSG CEEEEEEECCCCCCCEEEECCCCCHHHEEEEHEEECCCCCEEEEEECCCEEEEEECCCCC LDYEFSIRDIFEAISFYVADGVRLVKNPNKRWGSIDDGKFYDSEIKIYGPTRNTGTFESV CEEEEEHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEECCEEEEECCCCCCCCHHHH KRMVLLSQCLNEPAFNLAYGLEKLRKICSVVRDDGVYVEVSNNENLMVQKLARNHNAFGL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCEEE LSYSFFIRNSDALKAHSVNGVRPTYESIMSGQYDFVRPVYLYVKLTHLDFVRGLRDLLNE EEEEEEEECCCCCEECCCCCCCHHHHHHHCCCCHHHCEEEEEEEHHHHHHHHHHHHHHHH VLSENALGTYGYLRAVGMVPMPNQELGVIREKVASLSS HHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]