| Definition | Neorickettsia sennetsu str. Miyayama chromosome, complete genome. |
|---|---|
| Accession | NC_007798 |
| Length | 859,006 |
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The map label for this gene is 88608586
Identifier: 88608586
GI number: 88608586
Start: 575151
End: 575558
Strand: Direct
Name: 88608586
Synonym: NSE_0656
Alternate gene names: NA
Gene position: 575151-575558 (Clockwise)
Preceding gene: 88608455
Following gene: 88608237
Centisome position: 66.96
GC content: 46.57
Gene sequence:
>408_bases ATGCCACATCCAAGACACCTAAAACCAACAACATTAAAAGACTTCCTACCTGAAGGACTTACGAGTTCTTCAAATAGTGA TGAAGAGTCAGAGAAAAACCAAACATCTGAACCACAGGGTGGACAAGATCAATCAAATGATATGAGAGAAGGAGCAGCTG GTGGAGGTTCCGGAGGAAGCAACACCGCTCCCGCAGCAGATACAAAAGGTCCATTGCTATACCTGCAAAAAGTTAGAAGT GCACTGCGCCCTACTAACCCTTTTGGACCTTTTCCTCAGAGCAAAGAACCTCTTTCTGCTGCATGCACAAATCCATCTGC CACAGCACCAGGGTCAAAATTATCGGCAAGTGACACGGAGAAACACGCGGCAGATCAGGATAAAAATCGTGGCGGTGGAG TCACATGA
Upstream 100 bases:
>100_bases GAATGTTCCTAGTCGTATCAAGTAAAAAAATAGTAAGAAAATAGACAATTTTTTAATAAATCAAATCTACAATGAGACTG TTTTATCAGAACAGTTACGC
Downstream 100 bases:
>100_bases AAACGCCAAGAATTGACATACTACATCCTACTGTTCATAGTACAGTTGATGGAAAGTACGAGACCATGGATGCACCTCAT TTGTCAATCTCATTGATGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MPHPRHLKPTTLKDFLPEGLTSSSNSDEESEKNQTSEPQGGQDQSNDMREGAAGGGSGGSNTAPAADTKGPLLYLQKVRS ALRPTNPFGPFPQSKEPLSAACTNPSATAPGSKLSASDTEKHAADQDKNRGGGVT
Sequences:
>Translated_135_residues MPHPRHLKPTTLKDFLPEGLTSSSNSDEESEKNQTSEPQGGQDQSNDMREGAAGGGSGGSNTAPAADTKGPLLYLQKVRS ALRPTNPFGPFPQSKEPLSAACTNPSATAPGSKLSASDTEKHAADQDKNRGGGVT >Mature_134_residues PHPRHLKPTTLKDFLPEGLTSSSNSDEESEKNQTSEPQGGQDQSNDMREGAAGGGSGGSNTAPAADTKGPLLYLQKVRSA LRPTNPFGPFPQSKEPLSAACTNPSATAPGSKLSASDTEKHAADQDKNRGGGVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13958; Mature: 13827
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHPRHLKPTTLKDFLPEGLTSSSNSDEESEKNQTSEPQGGQDQSNDMREGAAGGGSGGS CCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCC NTAPAADTKGPLLYLQKVRSALRPTNPFGPFPQSKEPLSAACTNPSATAPGSKLSASDTE CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCH KHAADQDKNRGGGVT HHHCCCCCCCCCCCC >Mature Secondary Structure PHPRHLKPTTLKDFLPEGLTSSSNSDEESEKNQTSEPQGGQDQSNDMREGAAGGGSGGS CCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCC NTAPAADTKGPLLYLQKVRSALRPTNPFGPFPQSKEPLSAACTNPSATAPGSKLSASDTE CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCH KHAADQDKNRGGGVT HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA