Click here to switch to the map view.

The map label for this gene is 88608455

Identifier: 88608455

GI number: 88608455

Start: 574647

End: 574877

Strand: Direct

Name: 88608455

Synonym: NSE_0655

Alternate gene names: NA

Gene position: 574647-574877 (Clockwise)

Preceding gene: 88607970

Following gene: 88608586

Centisome position: 66.9

GC content: 43.29

Gene sequence:

>231_bases
TTGAGAGAACTAGGTCAAGGACACGGAATTAAGTCTCCTGGGAATGTGGAGATTGGTTTACATCTTTTGCTATTCCCACT
TTCCACATTGCTCTGCTTTTTATACACGTGCTGGATTATAGAATGGGGAATTGACATACAAAAGCCGGGTAATCACAACA
GGGAAATATTGCCTATCCCGAACCGGAAGAGACTCCTCAAGAGTGGGACGCTAGACCACTCTAACAATTAA

Upstream 100 bases:

>100_bases
TTTATCATTGCTTTTACTGCCCTGCTCACACCTTGTGTGTGCTTTTTATTGCATCACATGATCTCGTCCTTTCCCAAGTC
GGACCATACGTACTCGGGAT

Downstream 100 bases:

>100_bases
AAAGCTACTCCGCCTGACTCCAACTATGTAATTCAATAATCAATATATTTTGGGTAGTGCAAATCGTTTTGAATGCTTCT
TATTATGGCAAATGAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MRELGQGHGIKSPGNVEIGLHLLLFPLSTLLCFLYTCWIIEWGIDIQKPGNHNREILPIPNRKRLLKSGTLDHSNN

Sequences:

>Translated_76_residues
MRELGQGHGIKSPGNVEIGLHLLLFPLSTLLCFLYTCWIIEWGIDIQKPGNHNREILPIPNRKRLLKSGTLDHSNN
>Mature_76_residues
MRELGQGHGIKSPGNVEIGLHLLLFPLSTLLCFLYTCWIIEWGIDIQKPGNHNREILPIPNRKRLLKSGTLDHSNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8628; Mature: 8628

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRELGQGHGIKSPGNVEIGLHLLLFPLSTLLCFLYTCWIIEWGIDIQKPGNHNREILPIP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC
NRKRLLKSGTLDHSNN
CHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRELGQGHGIKSPGNVEIGLHLLLFPLSTLLCFLYTCWIIEWGIDIQKPGNHNREILPIP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC
NRKRLLKSGTLDHSNN
CHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA