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The map label for this gene is dksA

Identifier: 88608429

GI number: 88608429

Start: 130140

End: 130553

Strand: Direct

Name: dksA

Synonym: NSE_0162

Alternate gene names: 88608429

Gene position: 130140-130553 (Clockwise)

Preceding gene: 88608263

Following gene: 88608520

Centisome position: 15.15

GC content: 45.89

Gene sequence:

>414_bases
GTGGCTTTTTTTTTCTTTTACCCGATGTCTTCTGATGATATAAAAAATGCCGAGTATATGGGAGAAAGAATGCTTGCGTA
CTTTCATGAAAAGTTGATCGGTCTTAGGAATGCCATAGTAAATCAAGGGAAGGTTGTCAAAGACGTGCTGAGCAAGTGTG
CGAACTCATATGAGGCGGACGACATCATAATGTCCGCACAAAAGCGCAACTCATTGTTGAGTGAAATAGATGAGGCGCTT
GAACGCATGGAACAGGGTGTGTATGGCTACTGCGAGGAGACCGGTGACGAGATAGGCTTTGGTAGATTGGATCTCGAGCC
TACGGCCAGGTACTGCGTTGATGTGCAGGAAAGACTGGATAAGAAAAATCGTTTTCTTCGGTCCCCTGGGAGCGTAAATA
GTGAAGAGGGGTGA

Upstream 100 bases:

>100_bases
GTACTATTGACGACTTGCCACGAAACATATAAGGTTCTCTCTTTGGTAGCAAGTATAACATAATAGTTATTTAAGTTTAT
GATGTTAGAGTTCTGCCGGT

Downstream 100 bases:

>100_bases
TTTTTTGCTTTTGACAACTGTAGCACATGAGTGCAGAATAGTTCCCGTGTCCTATTATTTGGTCTGACTTGGTGGATAAG
GAGAATCTCAACAAAACTAA

Product: DnaK suppressor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MAFFFFYPMSSDDIKNAEYMGERMLAYFHEKLIGLRNAIVNQGKVVKDVLSKCANSYEADDIIMSAQKRNSLLSEIDEAL
ERMEQGVYGYCEETGDEIGFGRLDLEPTARYCVDVQERLDKKNRFLRSPGSVNSEEG

Sequences:

>Translated_137_residues
MAFFFFYPMSSDDIKNAEYMGERMLAYFHEKLIGLRNAIVNQGKVVKDVLSKCANSYEADDIIMSAQKRNSLLSEIDEAL
ERMEQGVYGYCEETGDEIGFGRLDLEPTARYCVDVQERLDKKNRFLRSPGSVNSEEG
>Mature_136_residues
AFFFFYPMSSDDIKNAEYMGERMLAYFHEKLIGLRNAIVNQGKVVKDVLSKCANSYEADDIIMSAQKRNSLLSEIDEALE
RMEQGVYGYCEETGDEIGFGRLDLEPTARYCVDVQERLDKKNRFLRSPGSVNSEEG

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 15659; Mature: 15528

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFFFFYPMSSDDIKNAEYMGERMLAYFHEKLIGLRNAIVNQGKVVKDVLSKCANSYEAD
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHH
DIIMSAQKRNSLLSEIDEALERMEQGVYGYCEETGDEIGFGRLDLEPTARYCVDVQERLD
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
KKNRFLRSPGSVNSEEG
HHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AFFFFYPMSSDDIKNAEYMGERMLAYFHEKLIGLRNAIVNQGKVVKDVLSKCANSYEAD
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHH
DIIMSAQKRNSLLSEIDEALERMEQGVYGYCEETGDEIGFGRLDLEPTARYCVDVQERLD
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
KKNRFLRSPGSVNSEEG
HHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9555902 [H]