Click here to switch to the map view.

The map label for this gene is 88608337

Identifier: 88608337

GI number: 88608337

Start: 80101

End: 80190

Strand: Direct

Name: 88608337

Synonym: NSE_0098

Alternate gene names: NA

Gene position: 80101-80190 (Clockwise)

Preceding gene: 88608514

Following gene: 88608073

Centisome position: 9.32

GC content: 37.78

Gene sequence:

>90_bases
ATGTTTTTATACGTAAGCATTACAGATAACCTTTACTTTGTGCGAGGTAAAGAGATCATACGTTTGCATTCACCGGAAAA
CCTTGGGTAG

Upstream 100 bases:

>100_bases
CTCCAGAAAGTCCAACGATTACATCTAGCATGTCTGTGTTTTTTAAGTACTTTCTCAGTTCATGGAGCACAGATAAATAG
TATTTTTCCAATTTAGGGTG

Downstream 100 bases:

>100_bases
ATTCATGATTTTATACTCATCTGGGTCTACAAGGTAGTCTCCAATTGGAATTCTGTGCCGTATTTCCACTATGTGAACAA
AGCATTCGTTGATGAAGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 29; Mature: 29

Protein sequence:

>29_residues
MFLYVSITDNLYFVRGKEIIRLHSPENLG

Sequences:

>Translated_29_residues
MFLYVSITDNLYFVRGKEIIRLHSPENLG
>Mature_29_residues
MFLYVSITDNLYFVRGKEIIRLHSPENLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3426; Mature: 3426

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLYVSITDNLYFVRGKEIIRLHSPENLG
CEEEEEECCCEEEEECCEEEEEECCCCCC
>Mature Secondary Structure
MFLYVSITDNLYFVRGKEIIRLHSPENLG
CEEEEEECCCEEEEECCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA