Click here to switch to the map view.

The map label for this gene is 88608307

Identifier: 88608307

GI number: 88608307

Start: 517410

End: 518708

Strand: Reverse

Name: 88608307

Synonym: NSE_0596

Alternate gene names: NA

Gene position: 518708-517410 (Counterclockwise)

Preceding gene: 88608149

Following gene: 88608034

Centisome position: 60.38

GC content: 42.49

Gene sequence:

>1299_bases
ATGCATAGTGGAGCAGTTGTTGAGGAAGAAGTAGGTAATTCCGAGTTTGTGCTTGTTTATCAACCTTTTTACGAAGGTAT
TATGAAAGGTATTCGTAACCTGTTGTTTTTGGATAAAACTAATCCTGCGTATTTGGTAACCCAGCTCTGGAGTGCTGGTG
CAGCGTCCATAGAACCTTATAGTGCGGCGATAAAAGAGAGAGTTGCGGTAAATGGGAGCTTATATAAAGGCGCTGCTAGA
AGGAGTTCGTTTGAGAACAGAAAGATTAGGGATGCAAACCAGTTAATGTGCAGTCTCTGCATTGTAGATGAACGAAGCAG
GGACCTTTTTCTTGATCTTTTTGAATATGCGCTCTGCGAATTTATTTCAGACTGCAAAAAACGCGATTTACCAGTGGGAT
CAAGCAGCATAGCGACGGTGTTAGAGGGGTTTAGAGAGTTTTTCAATAAGCGTCCCATCTATATGAGTATAAATACGATA
AAGGGTGCAGGTGCAATAAAGCTTGGTGCACCGAAAGAAGGCTACCTTGATGGTGATTCAGGTGGTTCGTGTATGCGTTT
TCACCCCGTTTTCTTTCGTTTTAAAAAAGAAACTTCGCAAAAGGAAGAGGTTAACACAACAATACTGCTCTTGTTCTTAT
CATCTTTAATAGACTTTTTTTCTATCCTGGTTGTAAATAAGGAGAGCCTCTTTAGGCGGGGAGGTGTAAAGGTATTTTAT
GAGGGCTTGCGCATCACAGAACGCGGTATTTCAGCTAGCGACGCCCATGCAGCAGAGTGTAAAAAGGAAAGAATGTTGTA
TATTGCCAATGAATTTTTGGCTAGTAATAAAGCAAGAAGGTGGGATTTTGCTCTTGAGGGTGTCGAGTTTCTTAGTCATG
ATGAACTTACTTATCTTCCTAAACGTGTTTTAGGTTCAGGCACAGTTGAGTGGGCAAAATGTCAGGCACACTTGTCTCCA
GATAATCTTTGTCATGACGGGAAAGAGGTTAGTGTAGAGGAAGTTTGTCAACGTTTGTATGGGTCTCGTCTGCTCAATGC
TTCATCGGATGGGGTCATGCATCCGGGTATGAGTGGACAATCGAAAATACTGTCGGAGGTGATTTCTCATACAGGGAGTT
CTGCCGTTCTTCCTCTTGGAAATAATTCAACGCATTTGAGTGCAGGTAATTATGTAGTTTTTGATCCTGTTACAACTGCT
TCTGCTGCCTCTATTTCTAGCGGCATTCCGAGTATGCTAGAAGAGCCTGCGGTTGTTGAATCCCCTGCAACCATTTCTTC
TTTTCTGGAGCGTGCTTAG

Upstream 100 bases:

>100_bases
TAGTAATACTTTACTTTAAATCTGAGTAACTGTCATATATAGCATATCGCTAATTATAGACAGAGTATTTTGTTTCTATT
GTTTGAGAAGTAAGAGTGTT

Downstream 100 bases:

>100_bases
GTTTTTGAGCACCGTATTAGGTTAGTTTTCTCGTTTGGGACGCCTCCTTGTTGGTTGTTCCATTCGAGCGGTTTTGCTTT
TACAGCAACTCTATCGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MHSGAVVEEEVGNSEFVLVYQPFYEGIMKGIRNLLFLDKTNPAYLVTQLWSAGAASIEPYSAAIKERVAVNGSLYKGAAR
RSSFENRKIRDANQLMCSLCIVDERSRDLFLDLFEYALCEFISDCKKRDLPVGSSSIATVLEGFREFFNKRPIYMSINTI
KGAGAIKLGAPKEGYLDGDSGGSCMRFHPVFFRFKKETSQKEEVNTTILLLFLSSLIDFFSILVVNKESLFRRGGVKVFY
EGLRITERGISASDAHAAECKKERMLYIANEFLASNKARRWDFALEGVEFLSHDELTYLPKRVLGSGTVEWAKCQAHLSP
DNLCHDGKEVSVEEVCQRLYGSRLLNASSDGVMHPGMSGQSKILSEVISHTGSSAVLPLGNNSTHLSAGNYVVFDPVTTA
SAASISSGIPSMLEEPAVVESPATISSFLERA

Sequences:

>Translated_432_residues
MHSGAVVEEEVGNSEFVLVYQPFYEGIMKGIRNLLFLDKTNPAYLVTQLWSAGAASIEPYSAAIKERVAVNGSLYKGAAR
RSSFENRKIRDANQLMCSLCIVDERSRDLFLDLFEYALCEFISDCKKRDLPVGSSSIATVLEGFREFFNKRPIYMSINTI
KGAGAIKLGAPKEGYLDGDSGGSCMRFHPVFFRFKKETSQKEEVNTTILLLFLSSLIDFFSILVVNKESLFRRGGVKVFY
EGLRITERGISASDAHAAECKKERMLYIANEFLASNKARRWDFALEGVEFLSHDELTYLPKRVLGSGTVEWAKCQAHLSP
DNLCHDGKEVSVEEVCQRLYGSRLLNASSDGVMHPGMSGQSKILSEVISHTGSSAVLPLGNNSTHLSAGNYVVFDPVTTA
SAASISSGIPSMLEEPAVVESPATISSFLERA
>Mature_432_residues
MHSGAVVEEEVGNSEFVLVYQPFYEGIMKGIRNLLFLDKTNPAYLVTQLWSAGAASIEPYSAAIKERVAVNGSLYKGAAR
RSSFENRKIRDANQLMCSLCIVDERSRDLFLDLFEYALCEFISDCKKRDLPVGSSSIATVLEGFREFFNKRPIYMSINTI
KGAGAIKLGAPKEGYLDGDSGGSCMRFHPVFFRFKKETSQKEEVNTTILLLFLSSLIDFFSILVVNKESLFRRGGVKVFY
EGLRITERGISASDAHAAECKKERMLYIANEFLASNKARRWDFALEGVEFLSHDELTYLPKRVLGSGTVEWAKCQAHLSP
DNLCHDGKEVSVEEVCQRLYGSRLLNASSDGVMHPGMSGQSKILSEVISHTGSSAVLPLGNNSTHLSAGNYVVFDPVTTA
SAASISSGIPSMLEEPAVVESPATISSFLERA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47591; Mature: 47591

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSGAVVEEEVGNSEFVLVYQPFYEGIMKGIRNLLFLDKTNPAYLVTQLWSAGAASIEPY
CCCCCCCHHHCCCCCEEEEECHHHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCCCCCHH
SAAIKERVAVNGSLYKGAARRSSFENRKIRDANQLMCSLCIVDERSRDLFLDLFEYALCE
HHHHHHHHHCCCHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FISDCKKRDLPVGSSSIATVLEGFREFFNKRPIYMSINTIKGAGAIKLGAPKEGYLDGDS
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEECCCCCCCCCCCC
GGSCMRFHPVFFRFKKETSQKEEVNTTILLLFLSSLIDFFSILVVNKESLFRRGGVKVFY
CCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEE
EGLRITERGISASDAHAAECKKERMLYIANEFLASNKARRWDFALEGVEFLSHDELTYLP
CCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHH
KRVLGSGTVEWAKCQAHLSPDNLCHDGKEVSVEEVCQRLYGSRLLNASSDGVMHPGMSGQ
HHHHCCCCCEEHHHEECCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
SKILSEVISHTGSSAVLPLGNNSTHLSAGNYVVFDPVTTASAASISSGIPSMLEEPAVVE
HHHHHHHHHCCCCCEEEECCCCCCEEECCCEEEECCCCCHHHHHHHCCCHHHHCCCCCCC
SPATISSFLERA
CCHHHHHHHHCC
>Mature Secondary Structure
MHSGAVVEEEVGNSEFVLVYQPFYEGIMKGIRNLLFLDKTNPAYLVTQLWSAGAASIEPY
CCCCCCCHHHCCCCCEEEEECHHHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCCCCCHH
SAAIKERVAVNGSLYKGAARRSSFENRKIRDANQLMCSLCIVDERSRDLFLDLFEYALCE
HHHHHHHHHCCCHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FISDCKKRDLPVGSSSIATVLEGFREFFNKRPIYMSINTIKGAGAIKLGAPKEGYLDGDS
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEECCCCCCCCCCCC
GGSCMRFHPVFFRFKKETSQKEEVNTTILLLFLSSLIDFFSILVVNKESLFRRGGVKVFY
CCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEE
EGLRITERGISASDAHAAECKKERMLYIANEFLASNKARRWDFALEGVEFLSHDELTYLP
CCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHH
KRVLGSGTVEWAKCQAHLSPDNLCHDGKEVSVEEVCQRLYGSRLLNASSDGVMHPGMSGQ
HHHHCCCCCEEHHHEECCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
SKILSEVISHTGSSAVLPLGNNSTHLSAGNYVVFDPVTTASAASISSGIPSMLEEPAVVE
HHHHHHHHHCCCCCEEEECCCCCCEEECCCEEEECCCCCHHHHHHHCCCHHHHCCCCCCC
SPATISSFLERA
CCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA