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The map label for this gene is 88608294

Identifier: 88608294

GI number: 88608294

Start: 12467

End: 13072

Strand: Direct

Name: 88608294

Synonym: NSE_0015

Alternate gene names: NA

Gene position: 12467-13072 (Clockwise)

Preceding gene: 88608767

Following gene: 88608674

Centisome position: 1.45

GC content: 40.92

Gene sequence:

>606_bases
ATGAAGCTTGGCAATTCTTGCTCGTTTAATGAGATCAGGGCATCTGTTTTGGATCAAAACACAGAGCTTTTGAGCGACCT
TCTCGATAAGTTGCAGACTGATGCCCTATTTAGAATGGTTGATAGCAATGGTGATATGATTCTCCACATTGCTTGCAACG
CAGGTAATGTTAAAGCAGTTCTCGCTGCTTTGGAGAGCGGTGCAGATCTAAACGCGAGAAATGAAAGTGCTGGAGATACA
CCTCTACACATTGCAATGAGAAGAGGGAACGTCGTCATAATAATGCACTTGCTTAACAATGGAGCTTCGGTTACAGAGAA
AAATTTCTCTGGCAACACACCTATACACGAGGCAGTCATTTCTAAAGTGGAAAAGAAAATACTGAAAAGGGTCGTAGAAA
GTTTTGTATCAACTGAGGCATCAAGTGAGCATTCTTCTCTACTGAATAAAGCCGGTAAAACGCCAATGGATATTGCAACT
GAAATGAACGACTCTGAAATTATCAGTACACTCATGCCCCTTGAAACTGCACTTACGCGAAAAAAGCGTTTTTCGAATTC
AGATAAATCTCAAATCCGTCCCAATGATTTTCATTGTGGTAACTGA

Upstream 100 bases:

>100_bases
AAGACTCTACTTTACTTTCACACGTAATTATAAGAATTTATACTAATTTAGACTACTATTTCGGGTATATTATTAAGATC
TATAAAACCCGGAGAAACAA

Downstream 100 bases:

>100_bases
AAGGGTAGTTTCTGAGAAAGATCACTTATCCACAGTAGAGTTTTTTTAGCTCTTCCAGATCTAAGTCCTTCTCTATTGTG
TGTCTTATTCTTTCCATGAG

Product: ankyrin repeat-containing protein

Products: NA

Alternate protein names: Ankyrin Repeat Protein; Ankyrin Domain Protein; Ankyrin Repeat-Containing Protein

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MKLGNSCSFNEIRASVLDQNTELLSDLLDKLQTDALFRMVDSNGDMILHIACNAGNVKAVLAALESGADLNARNESAGDT
PLHIAMRRGNVVIIMHLLNNGASVTEKNFSGNTPIHEAVISKVEKKILKRVVESFVSTEASSEHSSLLNKAGKTPMDIAT
EMNDSEIISTLMPLETALTRKKRFSNSDKSQIRPNDFHCGN

Sequences:

>Translated_201_residues
MKLGNSCSFNEIRASVLDQNTELLSDLLDKLQTDALFRMVDSNGDMILHIACNAGNVKAVLAALESGADLNARNESAGDT
PLHIAMRRGNVVIIMHLLNNGASVTEKNFSGNTPIHEAVISKVEKKILKRVVESFVSTEASSEHSSLLNKAGKTPMDIAT
EMNDSEIISTLMPLETALTRKKRFSNSDKSQIRPNDFHCGN
>Mature_201_residues
MKLGNSCSFNEIRASVLDQNTELLSDLLDKLQTDALFRMVDSNGDMILHIACNAGNVKAVLAALESGADLNARNESAGDT
PLHIAMRRGNVVIIMHLLNNGASVTEKNFSGNTPIHEAVISKVEKKILKRVVESFVSTEASSEHSSLLNKAGKTPMDIAT
EMNDSEIISTLMPLETALTRKKRFSNSDKSQIRPNDFHCGN

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI256574792, Length=79, Percent_Identity=45.5696202531646, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI32967601, Length=130, Percent_Identity=31.5384615384615, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21895; Mature: 21895

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGNSCSFNEIRASVLDQNTELLSDLLDKLQTDALFRMVDSNGDMILHIACNAGNVKAV
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHH
LAALESGADLNARNESAGDTPLHIAMRRGNVVIIMHLLNNGASVTEKNFSGNTPIHEAVI
HHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCEEECCCCCCCCHHHHHH
SKVEKKILKRVVESFVSTEASSEHSSLLNKAGKTPMDIATEMNDSEIISTLMPLETALTR
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH
KKRFSNSDKSQIRPNDFHCGN
HHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLGNSCSFNEIRASVLDQNTELLSDLLDKLQTDALFRMVDSNGDMILHIACNAGNVKAV
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHH
LAALESGADLNARNESAGDTPLHIAMRRGNVVIIMHLLNNGASVTEKNFSGNTPIHEAVI
HHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCEEECCCCCCCCHHHHHH
SKVEKKILKRVVESFVSTEASSEHSSLLNKAGKTPMDIATEMNDSEIISTLMPLETALTR
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH
KKRFSNSDKSQIRPNDFHCGN
HHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA