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The map label for this gene is 88608194

Identifier: 88608194

GI number: 88608194

Start: 404059

End: 404463

Strand: Reverse

Name: 88608194

Synonym: NSE_0489

Alternate gene names: NA

Gene position: 404463-404059 (Counterclockwise)

Preceding gene: 88608370

Following gene: 88608128

Centisome position: 47.09

GC content: 45.43

Gene sequence:

>405_bases
GTGCATTGCCCAAAGTGCAACAGTGTGAGGTTTATCAAGAGCGGCAAGGCAAAAGAAAAGCAGCGGTACAAGTGCTTGAA
TTGTGGGTGTCAGTTCAGCAGGAACGAAAAGCACGGGGCGCCACTTCGTTTAAAAATGCATGCAGTGCAGCTTTTTCTCT
CTGGGATTTCGATGAACTCCATTGCAAAGATATTTTCAGTGTCGCCACCAACGGTAATGCGATGGGTTAATCAGTTTAGT
GATTCATTTGGGGAGGATTTTCCCAAGAAGACCTCAAGCATCTCAGAAAGGAGTAACCTAGAAATAGTATGTGCTGACTT
AGGTAGTGAGACGGAGGTCATACTCTCACACATTACGGAGGAACTAATTTGTGTCACTATACGCAAGCCAGCCAGCGAAA
AGTGA

Upstream 100 bases:

>100_bases
TGCCAAGGACGAAGAATCCCTGGAAGGGAACTTGTTAAAAGATTTTCCAATACCTTTTGACATAAAAAAGCCACCTTTCT
GAGTTTCAAAAATTTCTACA

Downstream 100 bases:

>100_bases
GATCAACCTACTCTCTCTTGTATTGCAGGAACTAAGTCTAGATCTTCCCACTTGAAAGACATATCCGTAGGATTATATGA
ATGGCCAAAGTGACCTATTG

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MHCPKCNSVRFIKSGKAKEKQRYKCLNCGCQFSRNEKHGAPLRLKMHAVQLFLSGISMNSIAKIFSVSPPTVMRWVNQFS
DSFGEDFPKKTSSISERSNLEIVCADLGSETEVILSHITEELICVTIRKPASEK

Sequences:

>Translated_134_residues
MHCPKCNSVRFIKSGKAKEKQRYKCLNCGCQFSRNEKHGAPLRLKMHAVQLFLSGISMNSIAKIFSVSPPTVMRWVNQFS
DSFGEDFPKKTSSISERSNLEIVCADLGSETEVILSHITEELICVTIRKPASEK
>Mature_134_residues
MHCPKCNSVRFIKSGKAKEKQRYKCLNCGCQFSRNEKHGAPLRLKMHAVQLFLSGISMNSIAKIFSVSPPTVMRWVNQFS
DSFGEDFPKKTSSISERSNLEIVCADLGSETEVILSHITEELICVTIRKPASEK

Specific function: Unknown

COG id: COG3677

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15067; Mature: 15067

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHCPKCNSVRFIKSGKAKEKQRYKCLNCGCQFSRNEKHGAPLRLKMHAVQLFLSGISMNS
CCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCHHH
IAKIFSVSPPTVMRWVNQFSDSFGEDFPKKTSSISERSNLEIVCADLGSETEVILSHITE
HHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHH
ELICVTIRKPASEK
HHEEEEECCCCCCC
>Mature Secondary Structure
MHCPKCNSVRFIKSGKAKEKQRYKCLNCGCQFSRNEKHGAPLRLKMHAVQLFLSGISMNS
CCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCHHH
IAKIFSVSPPTVMRWVNQFSDSFGEDFPKKTSSISERSNLEIVCADLGSETEVILSHITE
HHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHH
ELICVTIRKPASEK
HHEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA